RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ARIH1Q9Y4X5 557 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 MYO16Q9Y6X6 1858 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 CCDC162PA2VCL2 907 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ABCB7O75027 752 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 NDUFS3O75489 264 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 SEC14L2O76054 403 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ATE1O95260 518 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 SIX3O95343 332 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 NDST3O95803 873 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 OCM2P0CE71 109 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 OCMP0CE72 109 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 THRBP10828 461 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 PORP16435 677 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 PCSK2P16519 638 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 CES1P23141 567 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 MAXP61244 160 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 PHEXP78562 749 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 CBX2Q14781 532 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 POLD3Q15054 466 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 SKIV2LQ15477 1246 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 RBBP7Q16576 425 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 NFE2Q16621 373 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 SMU1Q2TAY7 513 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 AARS2Q5JTZ9 985 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 PIK3R6Q5UE93 754 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 NANOGP8Q6NSW7 305 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 THAP5Q7Z6K1 395 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 C14orf80Q86SX3 495 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 IFNEQ86WN2 208 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ZFAND4Q86XD8 727 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 TTC30BQ8N4P2 665 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 SNX31Q8N9S9 440 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ZBTB8BQ8NAP8 495 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 OR8J3Q8NGG0 315 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 NPLOC4Q8TAT6 608 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ARRDC2Q8TBH0 407 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 TBC1D15Q8TC07 691 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 BLOC1S5Q8TDH9 187 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 BIRC7Q96CA5 298 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 FBXL20Q96IG2 436 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ZNF382Q96SR6 550 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ZBTB18Q99592 522 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 HGH1Q9BTY7 390 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 BEGAINQ9BUH8 593 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 CHID1Q9BWS9 393 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 TUBB1Q9H4B7 451 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 NANOGQ9H9S0 305 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 NLE1Q9NVX2 485 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 TNPO3Q9Y5L0 923 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 A0A1W2PQH9 124 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 UBA6A0AVT1 1052 aaPredicted RBP9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 J3KR12 359 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 PRSS23O95084 383 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 ARSAP15289 507 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 GSTM2P28161 218 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 SCNN1BP51168 640 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 KPNA1P52294 538 aaPredicted RBP9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 ARSFP54793 590 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 OCA2Q04671 838 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 NFATC3Q12968 1075 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 MAD2L1Q13257 205 aaPredicted RBP9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 SERINC3Q13530 473 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 TRIP4Q15650 581 aaPredicted RBP9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 RFX4Q33E94 735 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 GLYATQ6IB77 296 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 GPRIN3Q6ZVF9 776 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 NEK10Q6ZWH5 1172 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 SCD5Q86SK9 330 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 ZDHHC13Q8IUH4 622 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 CLEC4FQ8N1N0 589 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 MINDY2Q8NBR6 621 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 PDZD8Q8NEN9 1154 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 DNAJB8Q8NHS0 232 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 ITFG1Q8TB96 612 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 PSMG2Q969U7 264 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 LRCH3Q96II8 777 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 C8orf48Q96LL4 319 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 RNF145Q96MT1 663 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 CCDC115Q96NT0 180 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 SLC30A3Q99726 388 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 SEMA3CQ99985 751 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 SEMA4BQ9NPR2 832 aaPredicted RBP9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 HEBP1Q9NRV9 189 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 PSME2Q9UL46 239 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 PCDHB8Q9UN66 801 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 CLEC11AQ9Y240 323 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 BTRCQ9Y297 605 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 SNX5Q9Y5X3 404 aa9.96□□□□□ -0.82
UBE2D3-208ENST00000394803 CROCCQ5TZA2 2017 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 C2orf81A6NN90 581 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 DRGXA6NNA5 263 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 CFAP99D6REC4 459 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 ECI2O75521 394 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 S100BP04271 92 aaPredicted RBP9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 MTHFD1P11586 935 aaKnown RBP9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 MSH3P20585 1137 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 TTPAP49638 278 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 FOXA1P55317 472 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 MAP2K5Q13163 448 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 IL18R1Q13478 541 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms