RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 UGT3A1Q6NUS8 523 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 AFTPHQ6ULP2 937 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 ABRAXAS1Q6UWZ7 409 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 DHRSXQ8N5I4 330 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 SLC30A3Q99726 388 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 SEZ6LQ9BYH1 1024 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 CCDC68Q9H2F9 335 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 OLA1Q9NTK5 396 aaKnown RBP18.69■□□□□ 0.58
CBX1-202ENST00000393408 SLAMF8Q9P0V8 285 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 GALPQ9UBC7 116 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 CDC14AQ9UNH5 594 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 GREB1Q4ZG55 1949 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 KANSL1LA0AUZ9 987 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 ENPP3O14638 875 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 SNX2O60749 519 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 SOAT2O75908 522 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 RPS9P46781 194 aaKnown RBP18.69■□□□□ 0.58
CBX1-202ENST00000393408 FXNQ16595 210 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 NANOGP8Q6NSW7 305 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 SCIMPQ6UWF3 145 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 PATL1Q86TB9 770 aaKnown RBP18.69■□□□□ 0.58
CBX1-202ENST00000393408 OR4K2Q8NGD2 314 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 NSMCE3Q96MG7 304 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 NANOGQ9H9S0 305 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 ZFYVE28Q9HCC9 887 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 ZNF639Q9UID6 485 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 PCDHB5Q9Y5E4 795 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 ACTL7AQ9Y615 435 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 NCF1BA6NI72 391 aaPredicted RBP18.68■□□□□ 0.58
CBX1-202ENST00000393408 NCF1CA8MVU1 366 aaPredicted RBP18.68■□□□□ 0.58
CBX1-202ENST00000393408 BTN3A1O00481 513 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 SNAP91O60641 907 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 PFDN1O60925 122 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 NDUFS3O75489 264 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 MLYCDO95822 493 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 CHEK2O96017 543 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 NCF1P14598 390 aaPredicted RBP18.68■□□□□ 0.58
CBX1-202ENST00000393408 CES1P23141 567 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 MAGEA11P43364 429 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 STT3AP46977 705 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 ERVK-8P63133 956 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 AASDHQ4L235 1098 aaPredicted RBP18.68■□□□□ 0.58
CBX1-202ENST00000393408 TXNDC11Q6PKC3 985 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 COLGALT2Q8IYK4 626 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 OFCC1Q8IZS5 231 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 NKAPQ8N5F7 415 aaKnown RBP18.68■□□□□ 0.58
CBX1-202ENST00000393408 PLEKHG4BQ96PX9 1271 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 MGME1Q9BQP7 344 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 HGH1Q9BTY7 390 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 C1orf50Q9BV19 199 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 OSBPL6Q9BZF3 934 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 HIPK3Q9H422 1215 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 RPF2Q9H7B2 306 aaKnown RBP18.68■□□□□ 0.58
CBX1-202ENST00000393408 INTS7Q9NVH2 962 aaKnown RBP18.68■□□□□ 0.58
CBX1-202ENST00000393408 CDH7Q9ULB5 785 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 USP22Q9UPT9 525 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 DYTNA2CJ06 578 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 LDLRP01130 860 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 HRH2P25021 359 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 HOXD9P28356 352 aaPredicted RBP18.68■□□□□ 0.58
CBX1-202ENST00000393408 HTR1EP28566 365 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 IL12AP29459 219 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 SOX11P35716 441 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 TAF1CQ15572 869 aaPredicted RBP18.68■□□□□ 0.58
CBX1-202ENST00000393408 TIGD2Q4W5G0 525 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 USP51Q70EK9 711 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 LYSMD3Q7Z3D4 306 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 C2orf69Q8N8R5 385 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 ATAD1Q8NBU5 361 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 SOCS4Q8WXH5 440 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 BIRC7Q96CA5 298 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 ACOX2Q99424 681 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 ZIM2Q9NZV7 527 aa18.68■□□□□ 0.58
CBX1-202ENST00000393408 A0A0D9SEW6 157 aa18.67■□□□□ 0.58
CBX1-202ENST00000393408 FAM234BA2RU67 622 aa18.67■□□□□ 0.58
CBX1-202ENST00000393408 TSPAN12O95859 305 aa18.67■□□□□ 0.58
CBX1-202ENST00000393408 CASP2P42575 452 aa18.67■□□□□ 0.58
CBX1-202ENST00000393408 EMX2Q04743 252 aa18.67■□□□□ 0.58
CBX1-202ENST00000393408 DSC1Q08554 894 aa18.67■□□□□ 0.58
CBX1-202ENST00000393408 PMS2P3Q13401 168 aa18.67■□□□□ 0.58
CBX1-202ENST00000393408 RBBP7Q16576 425 aa18.67■□□□□ 0.58
CBX1-202ENST00000393408 PTPRNQ16849 979 aa18.67■□□□□ 0.58
CBX1-202ENST00000393408 ACBD5Q5T8D3 534 aaPredicted RBP18.67■□□□□ 0.58
CBX1-202ENST00000393408 KLHL35Q6PF15 583 aa18.67■□□□□ 0.58
CBX1-202ENST00000393408 MAGEE2Q8TD90 523 aaPredicted RBP18.67■□□□□ 0.58
CBX1-202ENST00000393408 UPF1Q92900 1129 aaKnown RBP eCLIP18.67■□□□□ 0.582e-8■■■■□ 26
CBX1-202ENST00000393408 CXorf21Q9HAI6 301 aa18.67■□□□□ 0.58
CBX1-202ENST00000393408 ENO2P09104 434 aaPredicted RBP18.66■□□□□ 0.58
CBX1-202ENST00000393408 TACR2P21452 398 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 PSMA3P25788 255 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 CDKN1CP49918 316 aaPredicted RBP18.66■□□□□ 0.58
CBX1-202ENST00000393408 HK3P52790 923 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 ADARB1P78563 741 aaKnown RBP18.66■□□□□ 0.58
CBX1-202ENST00000393408 RING1Q06587 406 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 TAF10Q12962 218 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 TAF1AQ15573 450 aaPredicted RBP18.66■□□□□ 0.58
CBX1-202ENST00000393408 MDGA1Q8NFP4 955 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 OR56A4Q8NGH8 313 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 OSCP1Q8WVF1 389 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 ISG20Q96AZ6 181 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms