RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 AHSA2Q719I0 299 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 SATL1Q86VE3 508 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 P2RY8Q86VZ1 359 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 CPNE8Q86YQ8 564 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 CHPFQ8IZ52 775 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 NTPCRQ9BSD7 190 aaKnown RBP13.04□□□□□ -0.32
LCA5-202ENST00000392959 DTLQ9NZJ0 730 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 PDE4DIPQ5VU43 2346 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 BCL9LQ86UU0 1499 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 GLYATL1P3A0A0U1RQE8 302 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 URADA6NGE7 173 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 IFNA16P05015 189 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 TSTD2Q5T7W7 516 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 USP50Q70EL3 339 aaPredicted RBP13.04□□□□□ -0.32
LCA5-202ENST00000392959 CHSY3Q70JA7 882 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 IRGQQ8WZA9 623 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 SLCO2A1Q92959 643 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 CXorf40BQ96DE9 158 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 HBEGFQ99075 208 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 LMAN2LQ9H0V9 348 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 XPNPEP1Q9NQW7 623 aa13.04□□□□□ -0.32
LCA5-202ENST00000392959 IRGMA1A4Y4 181 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 SAGE2PA6NJ88 616 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 CLDN25C9JDP6 229 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 OR10H2O60403 315 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 PSIP1O75475 530 aaKnown RBP13.03□□□□□ -0.32
LCA5-202ENST00000392959 UGT2B17O75795 530 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 FGBP02675 491 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 COL6A1P12109 1028 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 OR1D2P34982 312 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 HSPA7P48741 367 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 DUSP4Q13115 394 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 TAF13Q15543 124 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 LRP10Q7Z4F1 713 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 ATAD1Q8NBU5 361 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 HNRNPABQ99729 332 aaKnown RBP13.03□□□□□ -0.32
LCA5-202ENST00000392959 COQ10BQ9H8M1 238 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 EIF2B3Q9NR50 452 aaKnown RBP13.03□□□□□ -0.32
LCA5-202ENST00000392959 NUDT4Q9NZJ9 180 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 SEC14L3Q9UDX4 400 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 AJAP1Q9UKB5 411 aaPredicted RBP13.03□□□□□ -0.32
LCA5-202ENST00000392959 ISM1B1AKI9 464 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 BTN3A3O00478 584 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 OR5F1O95221 314 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 CLDN9O95484 217 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 C1RP00736 705 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 ICAM3P32942 547 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 SSR2P43308 183 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 KLRG1Q96E93 195 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 COL20A1Q9P218 1284 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 CNOT6Q9ULM6 557 aaKnown RBP13.03□□□□□ -0.32
LCA5-202ENST00000392959 PDE10AQ9Y233 779 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 MAFBQ9Y5Q3 323 aaPredicted RBP13.03□□□□□ -0.32
LCA5-202ENST00000392959 FABP3P05413 133 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 SLC5A3P53794 718 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 HNRNPDQ14103 355 aaKnown RBP13.03□□□□□ -0.32
LCA5-202ENST00000392959 C5orf22Q49AR2 442 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 TMEM214Q6NUQ4 689 aaKnown RBP13.03□□□□□ -0.32
LCA5-202ENST00000392959 C17orf64Q86WR6 236 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 ZZZ3Q8IYH5 903 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 GPR65Q8IYL9 337 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 C11orf65Q8NCR3 313 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 SPACA7Q96KW9 195 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 SLC9A7Q96T83 725 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 IGSF9Q9P2J2 1179 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 DNAJB4Q9UDY4 337 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 IRAK3Q9Y616 596 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 TNFRSF11BO00300 401 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 PMM2O15305 246 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 ELFN1P0C7U0 828 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 CTSEP14091 401 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 TAS2R41P59536 307 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 HKDC1Q2TB90 917 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 CCDC157Q569K6 752 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 OLFML1Q6UWY5 402 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 LBX2Q6XYB7 198 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 RNF19BQ6ZMZ0 732 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 GALNT15Q8N3T1 639 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 C3orf14Q9HBI5 128 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 GMIPQ9P107 970 aa13.03□□□□□ -0.32
LCA5-202ENST00000392959 FPGTO14772 594 aa13.02□□□□□ -0.32
LCA5-202ENST00000392959 PIP5K1BO14986 540 aa13.02□□□□□ -0.32
LCA5-202ENST00000392959 OR4F21O95013 312 aa13.02□□□□□ -0.32
LCA5-202ENST00000392959 H6PDO95479 791 aa13.02□□□□□ -0.32
LCA5-202ENST00000392959 PBX3P40426 434 aa13.02□□□□□ -0.32
LCA5-202ENST00000392959 TCEA2Q15560 299 aa13.02□□□□□ -0.32
LCA5-202ENST00000392959 ZFP69Q49AA0 526 aa13.02□□□□□ -0.32
LCA5-202ENST00000392959 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.02□□□□□ -0.32
LCA5-202ENST00000392959 VANGL1Q8TAA9 524 aaPredicted RBP13.02□□□□□ -0.32
LCA5-202ENST00000392959 MCMBPQ9BTE3 642 aa13.02□□□□□ -0.32
LCA5-202ENST00000392959 MCUBQ9NWR8 336 aa13.02□□□□□ -0.32
LCA5-202ENST00000392959 MIOSQ9NXC5 875 aa13.02□□□□□ -0.32
LCA5-202ENST00000392959 TUBA8Q9NY65 449 aaPredicted RBP13.02□□□□□ -0.32
LCA5-202ENST00000392959 MATN2O00339 956 aa13.02□□□□□ -0.33
LCA5-202ENST00000392959 SLC7A4O43246 635 aa13.02□□□□□ -0.33
LCA5-202ENST00000392959 CDH5P33151 784 aaPredicted RBP13.02□□□□□ -0.33
LCA5-202ENST00000392959 RPIAP49247 311 aa13.02□□□□□ -0.33
LCA5-202ENST00000392959 ABATP80404 500 aa13.02□□□□□ -0.33
LCA5-202ENST00000392959 RAB43Q86YS6 212 aa13.02□□□□□ -0.33
LCA5-202ENST00000392959 NAT8LQ8N9F0 302 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms