RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 TMEM74Q96NL1 305 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 DRG1Q9Y295 367 aaKnown RBP12.52□□□□□ -0.41
GGPS1-203ENST00000391855 ST14Q9Y5Y6 855 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 ARL5AQ9Y689 179 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 KIR2DS5A0A0G2JLQ3 304 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 A0A0G2JNG1 304 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 E7EVH7 732 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 KIR2DS3K7RE56 304 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 CEP104O60308 925 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 USP12O75317 370 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 F3P13726 295 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 ITGALP20701 1170 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 LMAN1P49257 510 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 MAZP56270 477 aaKnown RBP12.51□□□□□ -0.41
GGPS1-203ENST00000391855 CDH17Q12864 832 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 MSLNQ13421 630 aaPredicted RBP12.51□□□□□ -0.41
GGPS1-203ENST00000391855 SEMA5AQ13591 1074 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 LAMB3Q13751 1172 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 KIR2DS5Q14953 304 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 LONRF2Q1L5Z9 754 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 INSCQ1MX18 579 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 IGF2-ASQ6U949 168 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 SFRP1Q8N474 314 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 MDM1Q8TC05 714 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 ZNF398Q8TD17 642 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 HEXDCQ8WVB3 486 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 SH3KBP1Q96B97 665 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 PDLIM2Q96JY6 352 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 ZNF514Q96K75 400 aaPredicted RBP12.51□□□□□ -0.41
GGPS1-203ENST00000391855 PBKQ96KB5 322 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 NAP1L3Q99457 506 aaPredicted RBP12.51□□□□□ -0.41
GGPS1-203ENST00000391855 STRADBQ9C0K7 418 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 RABGEF1Q9UJ41 708 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 KCNK6Q9Y257 313 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 PLEKHM1Q9Y4G2 1056 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 PCDHB1Q9Y5F3 818 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 ENTPD2Q9Y5L3 495 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 AK5Q9Y6K8 562 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 KNTC1P50748 2209 aa12.51□□□□□ -0.41
GGPS1-203ENST00000391855 MYLKQ15746 1914 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 COL27A1Q8IZC6 1860 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 CEP295Q9C0D2 2601 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 ZFC3H1O60293 1989 aaKnown RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 CCDC187A0A096LP49 1063 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 A0A1W2PQM1 296 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 KLHL33A6NCF5 533 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 BUD23O43709 281 aaKnown RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 KIF5CO60282 957 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 SRP72O76094 671 aaKnown RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 DXOO77932 396 aaKnown RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 SUN1O94901 812 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 CPNE6O95741 557 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 RALBP11234 206 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 ZNF7P17097 686 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 CCKBRP32239 447 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 LSSP48449 732 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 ZNF140P52738 457 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 CCL7P80098 99 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 GPLD1P80108 840 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 CYP4F3Q08477 520 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 TMEM115Q12893 351 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 OLIG2Q13516 323 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 SPARCL1Q14515 664 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 GPRC6AQ5T6X5 926 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 CRTC3Q6UUV7 619 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 SLC9B2Q86UD5 537 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 TRAPPC5Q8IUR0 188 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 WDR36Q8NI36 951 aaKnown RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 SLC37A2Q8TED4 501 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 TMEM159Q96B96 161 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 LIN37Q96GY3 246 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 DPYSL5Q9BPU6 564 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 ASB8Q9H765 288 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 POLR1BQ9H9Y6 1135 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 ARFGAP3Q9NP61 516 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 SARS2Q9NP81 518 aaKnown RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 FKBPLQ9UIM3 349 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 TMPRSS11EQ9UL52 423 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 PRKAB1Q9Y478 270 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 PCDHGA8Q9Y5G5 932 aa12.5□□□□□ -0.41
GGPS1-203ENST00000391855 PCYT1BQ9Y5K3 369 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 DNMT3AQ9Y6K1 912 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 ARHGEF17Q96PE2 2063 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-203ENST00000391855 ASXL3Q9C0F0 2248 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 A6NCN8 305 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 AGAP14A8MT82 685 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 CFAP99D6REC4 459 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 H7C0S8 307 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 AP3B1O00203 1094 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 GAPDHSO14556 408 aaPredicted RBP12.49□□□□□ -0.41
GGPS1-203ENST00000391855 LDB2O43679 373 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 MTX2O75431 263 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 MSH3P20585 1137 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 AKT1P31749 480 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 INHBCP55103 352 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 GABREP78334 506 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 B4GALNT1Q00973 533 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 DMPKQ09013 629 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 NFATC2Q13469 925 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms