RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 NOP2P46087 812 aaKnown RBP12.83□□□□□ -0.36
RPAIN-202ENST00000381208 HADHBP55084 474 aaKnown RBP12.83□□□□□ -0.36
RPAIN-202ENST00000381208 LY6DQ14210 128 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 GALNT3Q14435 633 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 PLXDC1Q8IUK5 500 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 DTX3LQ8TDB6 740 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 TFB1MQ8WVM0 346 aaKnown RBP12.83□□□□□ -0.36
RPAIN-202ENST00000381208 GLYATL1Q969I3 302 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 TEKT5Q96M29 485 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 PLEKHG4BQ96PX9 1271 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 VAT1Q99536 393 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 TIMM29Q9BSF4 260 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 EFHD1Q9BUP0 239 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 GLOD4Q9HC38 313 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 SPTLC3Q9NUV7 552 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 SLC39A1Q9NY26 324 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 HACD3Q9P035 362 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 TBC1D29Q9UFV1 150 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 KCNK6Q9Y257 313 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 ZNF711Q9Y462 761 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 PIEZO2Q9H5I5 2752 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 CHUKO15111 745 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 KMOO15229 486 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 KCNJ13O60928 360 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 ZNF8P17098 575 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-202ENST00000381208 VCLP18206 1134 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 CEACAM20Q6UY09 585 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 ARHGAP22Q7Z5H3 698 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 LRRTM4Q86VH4 590 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 FAM129CQ86XR2 697 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 RBM12BQ8IXT5 1001 aaKnown RBP12.82□□□□□ -0.36
RPAIN-202ENST00000381208 IL22RA1Q8N6P7 574 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 LRRN4Q8WUT4 740 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 NCSTNQ92542 709 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 ART4Q93070 314 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 CALR3Q96L12 384 aaKnown RBP12.82□□□□□ -0.36
RPAIN-202ENST00000381208 VPS35Q96QK1 796 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 FERMT1Q9BQL6 677 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 OR2AG1Q9H205 316 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 TRIT1Q9H3H1 467 aaKnown RBP12.82□□□□□ -0.36
RPAIN-202ENST00000381208 FBXO8Q9NRD0 319 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 ATXN10Q9UBB4 475 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 CPNE7Q9UBL6 633 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 FAM153AQ9UHL3 310 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 SHOC2Q9UQ13 582 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.82□□□□□ -0.36
RPAIN-202ENST00000381208 ADGRG1Q9Y653 693 aa12.82□□□□□ -0.36
RPAIN-202ENST00000381208 TRBV23OR9-2A0A075B6M9 112 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 EFCAB7A8K855 629 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 AGRPO00253 132 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 TOX3O15405 576 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 SNX2O60749 519 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 PPFIA2O75334 1257 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 ANKRD34CP0C6C1 535 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 XRCC1P18887 633 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 COMTP21964 271 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 PTPN3P26045 913 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 HMGCLP35914 325 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 CDKN2BP42772 138 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 DYNLT1P63172 113 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 MC2RQ01718 297 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 NFATC2Q13469 925 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 PRKD1Q15139 912 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 PCSK7Q16549 785 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 TAZQ16635 292 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 TFDP3Q5H9I0 405 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 MFSD7Q6UXD7 560 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 WASH2PQ6VEQ5 465 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 TRIM48Q8IWZ4 208 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 GPR26Q8NDV2 337 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 BRSK1Q8TDC3 778 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 P3H4Q92791 437 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 NKD1Q969G9 470 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 EID2BQ96D98 161 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 CATSPER2Q96P56 530 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 ZCCHC2Q9C0B9 1178 aaKnown RBP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 SEMA4CQ9C0C4 833 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 WASH6PQ9NQA3 447 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 KLC4Q9NSK0 619 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 PRKAB1Q9Y478 270 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 B3GALT1Q9Y5Z6 326 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 FLNBO75369 2602 aaKnown RBP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 HACD1B0YJ81 288 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 CST8O60676 142 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 CDK14O94921 469 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 ZRANB2O95218 330 aaKnown RBP eCLIP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 EML2O95834 649 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 VIPP01282 170 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 ZNF7P17097 686 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 MAP4P27816 1152 aaKnown RBP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 UGT1A3P35503 534 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 MAGEA1P43355 309 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 UBE2IP63279 158 aaKnown RBP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 GTF2H3Q13889 308 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 INSCQ1MX18 579 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 ALS2CLQ60I27 953 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 CYB5D1Q6P9G0 228 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 NPNTQ6UXI9 565 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 KDELC2Q7Z4H8 507 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 ADGRG6Q86SQ4 1221 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms