RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 DBX2Q6ZNG2 339 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 RD3Q7Z3Z2 195 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 ADGRG6Q86SQ4 1221 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 TMEM135Q86UB9 458 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 TRIM74Q86UV6 250 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 GALNT13Q8IUC8 556 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 NOA1Q8NC60 698 aaKnown RBP11.8□□□□□ -0.52
PCNA-201ENST00000379143 OR6P1Q8NGX9 317 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 OR4L1Q8NH43 312 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 OR1E3Q8WZA6 343 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 HDAC10Q969S8 669 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 PDXPQ96GD0 296 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 ZNF514Q96K75 400 aaPredicted RBP11.8□□□□□ -0.52
PCNA-201ENST00000379143 SIGLEC10Q96LC7 697 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 ZNF778Q96MU6 729 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 CARD6Q9BX69 1037 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 FAM129AQ9BZQ8 928 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 DPH5Q9H2P9 285 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 CARS2Q9HA77 564 aaKnown RBP11.8□□□□□ -0.52
PCNA-201ENST00000379143 UGT1A7Q9HAW7 530 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 UGT1A10Q9HAW8 530 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 UGT1A8Q9HAW9 530 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 TRNAU1APQ9NX07 287 aaKnown RBP11.8□□□□□ -0.52
PCNA-201ENST00000379143 CDV3Q9UKY7 258 aaKnown RBP11.8□□□□□ -0.52
PCNA-201ENST00000379143 SUFUQ9UMX1 484 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 TMEM98Q9Y2Y6 226 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 MAD1L1Q9Y6D9 718 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 TRBV5-4A0A0C4DH59 114 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 CCDC162PA2VCL2 907 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 CFAP99D6REC4 459 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 CCL22O00626 93 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 DNAJC6O75061 913 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 CDK14O94921 469 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 TTC4O95801 387 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 ALPPL2P10696 532 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 PGAM1P18669 254 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 MSH3P20585 1137 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 NMBRP28336 390 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 AKT1P31749 480 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 ARSDP51689 593 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 IL9RQ01113 521 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 DHX9Q08211 1270 aaKnown RBP11.79□□□□□ -0.52
PCNA-201ENST00000379143 TMEM115Q12893 351 aaPredicted RBP11.79□□□□□ -0.52
PCNA-201ENST00000379143 ILF3Q12906 894 aaKnown RBP eCLIP11.79□□□□□ -0.52
PCNA-201ENST00000379143 BNIP3Q12983 259 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 FASTKD1Q53R41 847 aaKnown RBP11.79□□□□□ -0.52
PCNA-201ENST00000379143 FNBP1LQ5T0N5 605 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 GPRC6AQ5T6X5 926 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 KIAA0930Q6ICG6 404 aaPredicted RBP11.79□□□□□ -0.52
PCNA-201ENST00000379143 CENPUQ71F23 418 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 GKN2Q86XP6 184 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 NXPE1Q8N323 547 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 MPP5Q8N3R9 675 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 ZNF548Q8NEK5 533 aaPredicted RBP11.79□□□□□ -0.52
PCNA-201ENST00000379143 GABPB2Q8TAK5 448 aaPredicted RBP11.79□□□□□ -0.52
PCNA-201ENST00000379143 SCG3Q8WXD2 468 aaKnown RBP11.79□□□□□ -0.52
PCNA-201ENST00000379143 SEC14L1Q92503 715 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 ART4Q93070 314 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 MFSD3Q96ES6 412 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 STAMBPL1Q96FJ0 436 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 DCUN1D1Q96GG9 259 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 OR2M4Q96R27 311 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 COPS8Q99627 209 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 EBNA1BP2Q99848 306 aaKnown RBP11.79□□□□□ -0.52
PCNA-201ENST00000379143 LRRC61Q9BV99 259 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 DUSP23Q9BVJ7 150 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 FOXP3Q9BZS1 431 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 PHACTR1Q9C0D0 580 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 OR2AG1Q9H205 316 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 SUDS3Q9H7L9 328 aaPredicted RBP11.79□□□□□ -0.52
PCNA-201ENST00000379143 MRPL40Q9NQ50 206 aaKnown RBP11.79□□□□□ -0.52
PCNA-201ENST00000379143 FAM114A2Q9NRY5 505 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 GRHL1Q9NZI5 618 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 ATXN10Q9UBB4 475 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 SLC2A6Q9UGQ3 507 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 KLF15Q9UIH9 416 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 TMPRSS11EQ9UL52 423 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 PNMA8BQ9ULN7 279 aaPredicted RBP11.79□□□□□ -0.52
PCNA-201ENST00000379143 OAS3Q9Y6K5 1087 aaKnown RBP11.79□□□□□ -0.52
PCNA-201ENST00000379143 RPS6KL1Q9Y6S9 549 aa11.79□□□□□ -0.52
PCNA-201ENST00000379143 LRP4O75096 1905 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 KLHL33A6NCF5 533 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 LMO7DNF2Z398 122 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 TPP1O14773 563 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 SLC30A4O14863 429 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 CHUKO15111 745 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 SCAMP1O15126 338 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 PFDN6O15212 129 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 KMOO15229 486 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 TP73O15350 636 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 EIF3HO15372 352 aaKnown RBP eCLIP11.78□□□□□ -0.52
PCNA-201ENST00000379143 GPR39O43194 453 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 GRID2O43424 1007 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 SDC3O75056 442 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 VAPBO95292 243 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 GOT2P00505 430 aaKnown RBP11.78□□□□□ -0.52
PCNA-201ENST00000379143 CD59P13987 128 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 ZNF8P17098 575 aaPredicted RBP11.78□□□□□ -0.52
PCNA-201ENST00000379143 ACRV1P26436 265 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 FOXN2P32314 431 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms