RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 XPNPEP1Q9NQW7 623 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 NUDT4Q9NZJ9 180 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 EGFL7Q9UHF1 273 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 FKBPLQ9UIM3 349 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 IPO13O94829 963 aaKnown RBP13.53□□□□□ -0.24
GPC6-201ENST00000377047 SLC35G6P0C7Q6 338 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 DHPSP49366 369 aaPredicted RBP13.53□□□□□ -0.24
GPC6-201ENST00000377047 CYP4F3Q08477 520 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 EPS8Q12929 822 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 KIAA0408Q6ZU52 694 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 NET1Q7Z628 596 aaPredicted RBP13.53□□□□□ -0.24
GPC6-201ENST00000377047 SIDT2Q8NBJ9 832 aaKnown RBP13.53□□□□□ -0.24
GPC6-201ENST00000377047 ASB3Q9Y575 518 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 SIN3BO75182 1162 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 IL6P05231 212 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 SERPINA6P08185 405 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 TOP3AQ13472 1001 aaPredicted RBP13.53□□□□□ -0.24
GPC6-201ENST00000377047 AMZ1Q400G9 498 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 LRP10Q7Z4F1 713 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 DHDDSQ86SQ9 333 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 APLFQ8IW19 511 aaPredicted RBP13.53□□□□□ -0.24
GPC6-201ENST00000377047 PRSS58Q8IYP2 241 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 SRFBP1Q8NEF9 429 aaKnown RBP13.53□□□□□ -0.24
GPC6-201ENST00000377047 IL36AQ9UHA7 158 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 EFR3BQ9Y2G0 817 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 TIMM22Q9Y584 194 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 UGT2B17O75795 530 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 GJA1P17302 382 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 CCNA2P20248 432 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 AQP1P29972 269 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 ATXN1P54253 815 aaKnown RBP13.53□□□□□ -0.24
GPC6-201ENST00000377047 LGALS3BPQ08380 585 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 WFIKKN2Q8TEU8 576 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 FUBP3Q96I24 572 aaKnown RBP eCLIP13.53□□□□□ -0.24
GPC6-201ENST00000377047 NPAS2Q99743 824 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 IPPKQ9H8X2 491 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 SPATA2Q9UM82 520 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 YIPF1Q9Y548 306 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 FMN2Q9NZ56 1722 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 TCEA1P23193 301 aaKnown RBP13.53□□□□□ -0.24
GPC6-201ENST00000377047 TMEM192Q8IY95 271 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 XAGE5Q8WWM1 108 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 KLHL25Q9H0H3 589 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 POLR3BQ9NW08 1133 aaPredicted RBP13.53□□□□□ -0.24
GPC6-201ENST00000377047 A0A0J9YYE9 177 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 SNX3O60493 162 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 TBX18O95935 607 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 RNF43Q68DV7 783 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 DEPDC4Q8N2C3 294 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 ZCCHC7Q8N3Z6 543 aaKnown RBP13.52□□□□□ -0.24
GPC6-201ENST00000377047 UBR7Q8N806 425 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 ENKURQ8TC29 256 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 C12orf66Q96MD2 445 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 GAL3ST4Q96RP7 486 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 WWP2O00308 870 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 DHX15O43143 795 aaKnown RBP13.52□□□□□ -0.24
GPC6-201ENST00000377047 ASLP04424 464 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 NMBRP28336 390 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 GTF2H2Q13888 395 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 CARD16Q5EG05 197 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 GTF2H2CQ6P1K8 395 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 PROSER1Q86XN7 944 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 OR10H5Q8NGA6 315 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 STK32AQ8WU08 396 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 SH3GL2Q99962 352 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 RHBDL2Q9NX52 303 aa13.52□□□□□ -0.24
GPC6-201ENST00000377047 C2CD4BA6NLJ0 364 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 ADH5P11766 374 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 UGT1A5P35504 534 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 PLEKHG4Q58EX7 1191 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 PMEPA1Q969W9 287 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 ZFRQ96KR1 1074 aaKnown RBP13.52□□□□□ -0.25
GPC6-201ENST00000377047 TRMOQ9BU70 441 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 DAPK2Q9UIK4 370 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 CNOT6Q9ULM6 557 aaKnown RBP13.52□□□□□ -0.25
GPC6-201ENST00000377047 NOL4O94818 638 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 BPGMP07738 259 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 NUDT17P0C025 328 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 HNMTP50135 292 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 BLKP51451 505 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 MAPK12P53778 367 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 JAM2P57087 298 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 ARSIQ5FYB1 569 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 SPANXN2Q5MJ10 180 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 TSTD2Q5T7W7 516 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 MZT2AQ6P582 158 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 GK5Q6ZS86 529 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 NUS1Q96E22 293 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 TRMT61BQ9BVS5 477 aaKnown RBP13.52□□□□□ -0.25
GPC6-201ENST00000377047 OR2AG1Q9H205 316 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 MFHAS1Q9Y4C4 1052 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 RHAGQ02094 409 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 SOWAHAQ2M3V2 549 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 LDLRAP1Q5SW96 308 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 CADM2Q8N3J6 435 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 FBXO15Q8NCQ5 510 aaPredicted RBP13.52□□□□□ -0.25
GPC6-201ENST00000377047 PHC3Q8NDX5 983 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 SLC22A17Q8WUG5 538 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 C3orf18Q9UK00 162 aa13.52□□□□□ -0.25
GPC6-201ENST00000377047 TLR6Q9Y2C9 796 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms