RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 IL9RQ01113 521 aa16.16■□□□□ 0.18
TMEM53-203ENST00000372242 CBLBQ13191 982 aa16.16■□□□□ 0.18
TMEM53-203ENST00000372242 GPR33Q49SQ1 333 aa16.16■□□□□ 0.18
TMEM53-203ENST00000372242 FASTKD1Q53R41 847 aaKnown RBP16.16■□□□□ 0.18
TMEM53-203ENST00000372242 ADGRG6Q86SQ4 1221 aa16.16■□□□□ 0.18
TMEM53-203ENST00000372242 RBFAQ8N0V3 343 aa16.16■□□□□ 0.18
TMEM53-203ENST00000372242 DDHD1Q8NEL9 900 aa16.16■□□□□ 0.18
TMEM53-203ENST00000372242 C9orf72Q96LT7 481 aa16.16■□□□□ 0.18
TMEM53-203ENST00000372242 FMO2Q99518 471 aa16.16■□□□□ 0.18
TMEM53-203ENST00000372242 TRIM39Q9HCM9 518 aa16.16■□□□□ 0.18
TMEM53-203ENST00000372242 CATSPERZQ9NTU4 200 aa16.16■□□□□ 0.18
TMEM53-203ENST00000372242 MTRF1LQ9UGC7 380 aaKnown RBP16.16■□□□□ 0.18
TMEM53-203ENST00000372242 SLC17A4Q9Y2C5 497 aa16.16■□□□□ 0.18
TMEM53-203ENST00000372242 PRKAB1Q9Y478 270 aa16.16■□□□□ 0.18
TMEM53-203ENST00000372242 PCYT1BQ9Y5K3 369 aaPredicted RBP16.16■□□□□ 0.18
TMEM53-203ENST00000372242 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.16■□□□□ 0.18
TMEM53-203ENST00000372242 ZNF292O60281 2723 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 EIF3HO15372 352 aaKnown RBP eCLIP16.15■□□□□ 0.18
TMEM53-203ENST00000372242 CD3EAPO15446 510 aaKnown RBP16.15■□□□□ 0.18
TMEM53-203ENST00000372242 TTC4O95801 387 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 ACRV1P26436 265 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 AKT1P31749 480 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 PPARDQ03181 441 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 TMEM115Q12893 351 aaPredicted RBP16.15■□□□□ 0.18
TMEM53-203ENST00000372242 DBN1Q16643 649 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 LONRF1Q17RB8 773 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 LDLRAP1Q5SW96 308 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 PRR23CQ6ZRP0 262 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 CCNJLQ8IV13 435 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 GSPT2Q8IYD1 628 aaKnown RBP16.15■□□□□ 0.18
TMEM53-203ENST00000372242 MINDY1Q8N5J2 469 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 OTUD6BQ8N6M0 293 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 ELF4Q99607 663 aaPredicted RBP16.15■□□□□ 0.18
TMEM53-203ENST00000372242 BOCQ9BWV1 1114 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 FAM129AQ9BZQ8 928 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 FOXP3Q9BZS1 431 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 ZDHHC5Q9C0B5 715 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 ERVMER34-1Q9H9K5 563 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 C20orf96Q9NUD7 363 aaPredicted RBP16.15■□□□□ 0.18
TMEM53-203ENST00000372242 SUFUQ9UMX1 484 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 TNFRSF10CO14798 259 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 GFRA3O60609 400 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 SDC3O75056 442 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 CDK14O94921 469 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 CSF2P04141 144 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 F7P08709 466 aaPredicted RBP16.15■□□□□ 0.18
TMEM53-203ENST00000372242 ERVK-10P10266 1014 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 ZNF8P17098 575 aaPredicted RBP16.15■□□□□ 0.18
TMEM53-203ENST00000372242 JUNDP17535 347 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 MAGEA4P43358 317 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 HK3P52790 923 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 ATXN3P54252 364 aaPredicted RBP16.15■□□□□ 0.18
TMEM53-203ENST00000372242 B4GALNT1Q00973 533 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 ZNF423Q2M1K9 1284 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 ERCC6LQ2NKX8 1250 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 SPANXN3Q5MJ09 141 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 NEPROQ6NW34 567 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 IL27RAQ6UWB1 636 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 DET1Q7L5Y6 550 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 UBXN4Q92575 508 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 ULK4Q96C45 1275 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 SGSM3Q96HU1 749 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 TTC25Q96NG3 672 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 COPS8Q99627 209 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 CARS2Q9HA77 564 aaKnown RBP16.15■□□□□ 0.18
TMEM53-203ENST00000372242 VPS18Q9P253 973 aa16.15■□□□□ 0.18
TMEM53-203ENST00000372242 TDRD6O60522 2096 aaKnown RBP16.15■□□□□ 0.18
TMEM53-203ENST00000372242 LRP4O75096 1905 aa16.14■□□□□ 0.18
TMEM53-203ENST00000372242 RIF1Q5UIP0 2472 aaKnown RBP16.14■□□□□ 0.17
TMEM53-203ENST00000372242 GDF9O60383 454 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 DNAJC6O75061 913 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 MYBL2P10244 700 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 NME1P15531 152 aaKnown RBP16.14■□□□□ 0.17
TMEM53-203ENST00000372242 SSTR1P30872 391 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 GNPDA1P46926 289 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 BNIP3Q12983 259 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 SHBQ15464 509 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 HSP90AA5PQ58FG0 334 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 STEAP4Q687X5 459 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 TRMT10BQ6PF06 316 aaKnown RBP16.14■□□□□ 0.17
TMEM53-203ENST00000372242 PALM2Q8IXS6 379 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 PHACTR4Q8IZ21 702 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 RASGEF1AQ8N9B8 481 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 EDEM2Q9BV94 578 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 PHACTR1Q9C0D0 580 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 ZDHHC3Q9NYG2 299 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 ZNHIT2Q9UHR6 403 aa16.14■□□□□ 0.17
TMEM53-203ENST00000372242 OR2AG2A6NM03 316 aa16.13■□□□□ 0.17
TMEM53-203ENST00000372242 CDX4O14627 284 aaPredicted RBP16.13■□□□□ 0.17
TMEM53-203ENST00000372242 OR1I1O60431 355 aa16.13■□□□□ 0.17
TMEM53-203ENST00000372242 RASGRP1O95267 797 aa16.13■□□□□ 0.17
TMEM53-203ENST00000372242 CER1O95813 267 aa16.13■□□□□ 0.17
TMEM53-203ENST00000372242 FAM153BP0C7A2 387 aa16.13■□□□□ 0.17
TMEM53-203ENST00000372242 MSH3P20585 1137 aa16.13■□□□□ 0.17
TMEM53-203ENST00000372242 ARRB1P49407 418 aaPredicted RBP16.13■□□□□ 0.17
TMEM53-203ENST00000372242 TUBB4BP68371 445 aa16.13■□□□□ 0.17
TMEM53-203ENST00000372242 THOC5Q13769 683 aaKnown RBP16.13■□□□□ 0.17
TMEM53-203ENST00000372242 NAA30Q147X3 362 aaPredicted RBP16.13■□□□□ 0.17
TMEM53-203ENST00000372242 FAM153CQ494X1 144 aa16.13■□□□□ 0.17
TMEM53-203ENST00000372242 AASDHQ4L235 1098 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms