RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 FPGSQ05932 587 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 MADCAM1Q13477 382 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 GPM6BQ13491 265 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 RNF43Q68DV7 783 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 PROSER1Q86XN7 944 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 TEX47Q8TBZ9 253 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 IRGQQ8WZA9 623 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 TRAPPC9Q96Q05 1148 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SLC38A2Q96QD8 506 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 COQ7Q99807 217 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 HEPHQ9BQS7 1158 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 ARL8BQ9NVJ2 186 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 PCDHGC3Q9UN70 934 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 MYOM1P52179 1685 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 RHPN2P1A8MT19 583 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 BIRC5O15392 142 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 TPST2O60704 377 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 IPO13O94829 963 aaKnown RBP12.81□□□□□ -0.36
PTPRK-207ENST00000368226 CFHP08603 1231 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 PTPN5P54829 565 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 RNASE12Q5GAN4 147 aaKnown RBP12.81□□□□□ -0.36
PTPRK-207ENST00000368226 ECHDC2Q86YB7 292 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 CAMK1DQ8IU85 385 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 HOMEZQ8IX15 550 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 CPNE9Q8IYJ1 553 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 ADCY4Q8NFM4 1077 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 STYXQ8WUJ0 223 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 SMG9Q9H0W8 520 aaKnown RBP12.81□□□□□ -0.36
PTPRK-207ENST00000368226 CCSER2Q9H7U1 834 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 IGKV6D-41A0A0C4DH26 115 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 A0A0G2JN53 185 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 FPGTO14772 594 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 MTX2O75431 263 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 MED26O95402 600 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 DBTP11182 482 aaKnown RBP12.81□□□□□ -0.36
PTPRK-207ENST00000368226 ITGAXP20702 1163 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 HNRNPH3P31942 346 aaKnown RBP12.81□□□□□ -0.36
PTPRK-207ENST00000368226 GNPDA1P46926 289 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 MSANTD2Q6P1R3 559 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 OR52J3Q8NH60 311 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 KAT2AQ92830 837 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 CEP44Q9C0F1 390 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 MINDY3Q9H8M7 445 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 CLEC4AQ9UMR7 237 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 CORO2BQ9UQ03 480 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 C15orf41Q9Y2V0 281 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 CLUHO75153 1309 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 MATN3O15232 486 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 ANPEPP15144 967 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 CCNA2P20248 432 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 DGUOKQ16854 277 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 ANXA8L1Q5VT79 327 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 RTL3Q8N8U3 475 aaKnown RBP12.81□□□□□ -0.36
PTPRK-207ENST00000368226 MTMR14Q8NCE2 650 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 SUCOQ9UBS9 1254 aaKnown RBP12.81□□□□□ -0.36
PTPRK-207ENST00000368226 CCNDBP1O95273 360 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 ALPIP09923 528 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 NUDT17P0C025 328 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 CCL5P13501 91 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 ST13P50502 369 aaKnown RBP12.81□□□□□ -0.36
PTPRK-207ENST00000368226 JAG1P78504 1218 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 ARHGAP1Q07960 439 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 SLC44A4Q53GD3 710 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 CCDC92Q53HC0 331 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-207ENST00000368226 ULK2Q8IYT8 1036 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 MSL3Q8N5Y2 521 aaKnown RBP12.81□□□□□ -0.36
PTPRK-207ENST00000368226 FBXO15Q8NCQ5 510 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-207ENST00000368226 ADAMTS15Q8TE58 950 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 SLC44A1Q8WWI5 657 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 LCN9Q8WX39 176 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 ZNF607Q96SK3 696 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 OR2AG1Q9H205 316 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 EIF2B4Q9UI10 523 aaKnown RBP12.81□□□□□ -0.36
PTPRK-207ENST00000368226 FBXW11Q9UKB1 542 aa12.81□□□□□ -0.36
PTPRK-207ENST00000368226 PAIP2BQ9ULR5 123 aaKnown RBP12.81□□□□□ -0.36
PTPRK-207ENST00000368226 DHRS12A0PJE2 317 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 C2CD4BA6NLJ0 364 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 METTL18O95568 372 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 PTDSS1P48651 473 aaKnown RBP12.8□□□□□ -0.36
PTPRK-207ENST00000368226 GTF2H2Q13888 395 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 GTF2H2CQ6P1K8 395 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 ARMCX6Q7L4S7 300 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 PACS2Q86VP3 889 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 FUKQ8N0W3 1084 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 ZNF516Q92618 1163 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 DLG3Q92796 817 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 PTCD3Q96EY7 689 aaKnown RBP12.8□□□□□ -0.36
PTPRK-207ENST00000368226 NUAK2Q9H093 628 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 LRCH1Q9Y2L9 728 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 STON1Q9Y6Q2 735 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 SERPINB7O75635 380 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 TSHRP16473 764 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 RYKP34925 604 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 RPL3P39023 403 aaKnown RBP12.8□□□□□ -0.36
PTPRK-207ENST00000368226 RHAGQ02094 409 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 GRSF1Q12849 480 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTPRK-207ENST00000368226 MRPS26Q9BYN8 205 aaKnown RBP12.8□□□□□ -0.36
PTPRK-207ENST00000368226 PLLPQ9Y342 182 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 UBR1Q8IWV7 1749 aa12.8□□□□□ -0.36
PTPRK-207ENST00000368226 POP4O95707 220 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms