RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 RTP5Q14D33 572 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 CHRNA6Q15825 494 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 LONRF2Q1L5Z9 754 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 LDLRAP1Q5SW96 308 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 CERCAMQ5T4B2 595 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 ZNF648Q5T619 568 aaPredicted RBP9.74□□□□□ -0.85
CD48-202ENST00000368046 SLC30A9Q6PML9 568 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 C4orf22Q6V702 233 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 SFTPA2Q8IWL1 248 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 NAGSQ8N159 534 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 OR4K2Q8NGD2 314 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 GDAP1Q8TB36 358 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 PBKQ96KB5 322 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 DEPDC7Q96QD5 511 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 KCNF1Q9H3M0 494 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 CCDC86Q9H6F5 360 aaKnown RBP9.74□□□□□ -0.85
CD48-202ENST00000368046 ETNK1Q9HBU6 452 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 ARFGAP3Q9NP61 516 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 DKK4Q9UBT3 224 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 TMPRSS11EQ9UL52 423 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 PRKAB1Q9Y478 270 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 KCTD3Q9Y597 815 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 PCYT1BQ9Y5K3 369 aaPredicted RBP9.74□□□□□ -0.85
CD48-202ENST00000368046 ARL5AQ9Y689 179 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 RNF215Q9Y6U7 377 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 SPEGQ15772 3267 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 ARID1BQ8NFD5 2236 aaPredicted RBP9.74□□□□□ -0.85
CD48-202ENST00000368046 OR5K4A6NMS3 321 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 AGAP14A8MT82 685 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 NTN3O00634 580 aaPredicted RBP9.73□□□□□ -0.85
CD48-202ENST00000368046 KMOO15229 486 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 PPM1DO15297 605 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 MAP3K7O43318 606 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 B4GAT1O43505 415 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 LDB2O43679 373 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 KCNJ13O60928 360 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 SRP72O76094 671 aaKnown RBP9.73□□□□□ -0.85
CD48-202ENST00000368046 TPH1P17752 444 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 MSNP26038 577 aaKnown RBP9.73□□□□□ -0.85
CD48-202ENST00000368046 GPR3P46089 330 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 CCL7P80098 99 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 XIAPP98170 497 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 B4GALNT1Q00973 533 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 CYP4F3Q08477 520 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 SPIDRQ14159 915 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 ST3GAL2Q16842 350 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 ISXQ2M1V0 245 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 IYDQ6PHW0 289 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 FAM151BQ6UXP7 276 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 RBM44Q6ZP01 1051 aaKnown RBP9.73□□□□□ -0.85
CD48-202ENST00000368046 LRRTM4Q86VH4 590 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 RASGEF1CQ8N431 466 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 TAB3Q8N5C8 712 aaPredicted RBP9.73□□□□□ -0.85
CD48-202ENST00000368046 CCDC89Q8N998 374 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 OR13C4Q8NGS5 318 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 CCDC74AQ96AQ1 378 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 GFM1Q96RP9 751 aaKnown RBP9.73□□□□□ -0.85
CD48-202ENST00000368046 LRRN3Q9H3W5 708 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 ASB8Q9H765 288 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 KLC4Q9NSK0 619 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 TRMT1Q9NXH9 659 aaKnown RBP9.73□□□□□ -0.85
CD48-202ENST00000368046 PAK5Q9P286 719 aa9.73□□□□□ -0.85
CD48-202ENST00000368046 DNMT3AQ9Y6K1 912 aaPredicted RBP9.73□□□□□ -0.85
CD48-202ENST00000368046 TP53BP1Q12888 1972 aaPredicted RBP9.72□□□□□ -0.85
CD48-202ENST00000368046 AKAP13Q12802 2813 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 TDRD6O60522 2096 aaKnown RBP9.72□□□□□ -0.85
CD48-202ENST00000368046 TRBV23OR9-2A0A075B6M9 112 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 A0A1W2PQM1 296 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 RHPN2P1A8MT19 583 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 E7EVH7 732 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 TMX2-CTNND1H3BSU7 103 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 GAPDHSO14556 408 aaPredicted RBP9.72□□□□□ -0.85
CD48-202ENST00000368046 KIF5CO60282 957 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 CSO75390 466 aaKnown RBP9.72□□□□□ -0.85
CD48-202ENST00000368046 MTX2O75431 263 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 SUN1O94901 812 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 GAS8O95995 478 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 ACP5P13686 325 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 ETS1P14921 441 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 ZNF7P17097 686 aaPredicted RBP9.72□□□□□ -0.85
CD48-202ENST00000368046 RPL22P35268 128 aaKnown RBP9.72□□□□□ -0.85
CD48-202ENST00000368046 KCNJ1P48048 391 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 LMAN1P49257 510 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 MAZP56270 477 aaKnown RBP9.72□□□□□ -0.85
CD48-202ENST00000368046 CDH17Q12864 832 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 BIRC2Q13490 618 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 SQSTM1Q13501 440 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 SEMA5AQ13591 1074 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 GTF2H3Q13889 308 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 NR1D2Q14995 579 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 KHDC1Q4VXA5 237 aaKnown RBP9.72□□□□□ -0.85
CD48-202ENST00000368046 TREML4Q6UXN2 200 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 GSTA5Q7RTV2 222 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 LSMEM2Q8N112 164 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 SLC35F6Q8N357 371 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 SFRP1Q8N474 314 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 PRELID2Q8N945 189 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 Q8N9G6 341 aaPredicted RBP9.72□□□□□ -0.85
CD48-202ENST00000368046 DNAAF3Q8N9W5 541 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 DDHD1Q8NEL9 900 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms