RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 RBFAQ8N0V3 343 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 TBX5Q99593 518 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 ZNF670Q9BS34 389 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 PLEKHA1Q9HB21 404 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 HPF1Q9NWY4 346 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 QSOX1O00391 747 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 SNX4O95219 450 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 PCCBP05166 539 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 NRG3P56975 720 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 XIAPP98170 497 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 P2RX7Q99572 595 aaKnown RBP15.93■□□□□ 0.14
COL18A1-203ENST00000359759 RPLP2P05387 115 aaKnown RBP15.93■□□□□ 0.14
COL18A1-203ENST00000359759 PLEKHG4Q58EX7 1191 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 DCST1Q5T197 706 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 GPR158Q5T848 1215 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 NXF3Q9H4D5 531 aaKnown RBP15.93■□□□□ 0.14
COL18A1-203ENST00000359759 LRRC4CQ9HCJ2 640 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 ASAH2Q9NR71 780 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 NEDD8-MDP1E9PL57 170 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 DHX15O43143 795 aaKnown RBP15.93■□□□□ 0.14
COL18A1-203ENST00000359759 SLC20A2Q08357 652 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 PITRM1Q5JRX3 1037 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 C1orf186Q6ZWK4 172 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 CBR4Q8N4T8 237 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 SPOCK2Q92563 424 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 SLC6A15Q9H2J7 730 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 FKBP7Q9Y680 259 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 PNPLA6Q8IY17 1366 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 FADS2P1A8MWK0 482 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 ZNF208O43345 1280 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 MSI1O43347 362 aaKnown RBP15.93■□□□□ 0.14
COL18A1-203ENST00000359759 ALAS2P22557 587 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 TSPAN5P62079 268 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 HSPB3Q12988 150 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 SLC1A5Q15758 541 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 INTS5Q6P9B9 1019 aaKnown RBP15.93■□□□□ 0.14
COL18A1-203ENST00000359759 P2RY8Q86VZ1 359 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 FAM110BQ8TC76 370 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 FAM84AQ96KN4 292 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 SLC27A6Q9Y2P4 619 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 ELOVL7A1L3X0 281 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 RIIAD1A6NNX1 92 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 PLK4O00444 970 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 NUDT17P0C025 328 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 PTPRAP18433 802 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 NAE1Q13564 534 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 PABPC1LQ4VXU2 614 aaKnown RBP15.92■□□□□ 0.14
COL18A1-203ENST00000359759 FAM71AQ8IYT1 594 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 MYO19Q96H55 970 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 CLUHO75153 1309 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 ZNF806P0C7X5 589 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 TSHRP16473 764 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 ECHS1P30084 290 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 CDH12P55289 794 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 TARBP2Q15633 366 aaKnown RBP15.92■□□□□ 0.14
COL18A1-203ENST00000359759 CHERPQ8IWX8 916 aaKnown RBP15.92■□□□□ 0.14
COL18A1-203ENST00000359759 FAM156AQ8NDB6 213 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 CCDC54Q8NEL0 328 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 TMEM27Q9HBJ8 222 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 PREX2Q70Z35 1606 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 SCAMP1O15126 338 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 CDK18Q07002 472 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 SCN1BQ07699 218 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 MREGQ8N565 214 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 ZFP3Q96NJ6 502 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 PTPN18Q99952 460 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 PRDM16Q9HAZ2 1276 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 PLLPQ9Y342 182 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 PPIBP23284 216 aaKnown RBP15.92■□□□□ 0.14
COL18A1-203ENST00000359759 CRHR1P34998 444 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 MAGEA12P43365 314 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 ZNF697Q5TEC3 545 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 SH3RF1Q7Z6J0 888 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 P2RY11Q96G91 374 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 SNTG1Q9NSN8 517 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 SMPD3Q9NY59 655 aaPredicted RBP15.92■□□□□ 0.14
COL18A1-203ENST00000359759 PCDHGA10Q9Y5H3 936 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 C5orf51A6NDU8 294 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 GCATO75600 419 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 AKR1A1P14550 325 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 FMO3P31513 532 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 WNT3AP56704 352 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 CSTF1Q05048 431 aaKnown RBP15.92■□□□□ 0.14
COL18A1-203ENST00000359759 C4orf46Q504U0 113 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 PYHIN1Q6K0P9 492 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 LIX1Q8N485 282 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 OR10H4Q8NGA5 316 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 SPATA31A1Q5TZJ5 1347 aa15.92■□□□□ 0.14
COL18A1-203ENST00000359759 PGLSO95336 258 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 PEX2P28328 305 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 RPS9P46781 194 aaKnown RBP15.91■□□□□ 0.14
COL18A1-203ENST00000359759 ACAP2Q15057 778 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 TLR1Q15399 786 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 PAOXQ6QHF9 649 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 RBM23Q86U06 439 aaKnown RBP15.91■□□□□ 0.14
COL18A1-203ENST00000359759 CRYBG2Q8N1P7 616 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 ZC3H10Q96K80 434 aaKnown RBP15.91■□□□□ 0.14
COL18A1-203ENST00000359759 DNAJC28Q9NX36 388 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 NCOA3Q9Y6Q9 1424 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 UNC13BO14795 1591 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms