RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 FKTNO75072 461 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 C8BP07358 591 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 DNASE1L1P49184 302 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 AP5B1Q2VPB7 878 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 ZBED5Q49AG3 693 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 DCST1Q5T197 706 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 CXorf57Q6NSI4 855 aaKnown RBP12.77□□□□□ -0.37
SMC4-202ENST00000357388 ZNF730Q6ZMV8 503 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 LRRC69Q6ZNQ3 347 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 SH3RF1Q7Z6J0 888 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 DEFB132Q7Z7B7 95 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 BEND7Q8N7W2 519 aaPredicted RBP12.77□□□□□ -0.37
SMC4-202ENST00000357388 PHC3Q8NDX5 983 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 ZFAND2BQ8WV99 257 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 COL26A1Q96A83 441 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 GAS2L1Q99501 681 aaPredicted RBP12.77□□□□□ -0.37
SMC4-202ENST00000357388 GTPBP2Q9BX10 602 aaKnown RBP12.77□□□□□ -0.37
SMC4-202ENST00000357388 PRRG4Q9BZD6 226 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 HPF1Q9NWY4 346 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 LGALS13Q9UHV8 139 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.37
SMC4-202ENST00000357388 SLC15A5A6NIM6 579 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 EFCAB9A8MZ26 197 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 IFNW1P05000 195 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 TPSB2P20231 275 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 ALDH4A1P30038 563 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 NDUFV1P49821 464 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 MAPK12P53778 367 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 TPSAB1Q15661 275 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 UNC5BQ8IZJ1 945 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 GPER1Q99527 375 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 COMMD4Q9H0A8 199 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 BLOC1S4Q9NUP1 217 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 C14orf105Q9NVL8 296 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 PTPRUQ92729 1446 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 GNPDA1P46926 289 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 NUMBP49757 651 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 RARRES1P49788 294 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 SIM2Q14190 667 aaPredicted RBP12.76□□□□□ -0.37
SMC4-202ENST00000357388 SMU1Q2TAY7 513 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 WSCD2Q2TBF2 565 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 RNASE12Q5GAN4 147 aaKnown RBP12.76□□□□□ -0.37
SMC4-202ENST00000357388 TMEM17Q86X19 198 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 SLC30A8Q8IWU4 369 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 ZNF433Q8N7K0 673 aaPredicted RBP12.76□□□□□ -0.37
SMC4-202ENST00000357388 RAD51AP1Q96B01 352 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 FBXO5Q9UKT4 447 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 A8MUI8 341 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 E5RJQ4 531 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 CCNB2O95067 398 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 GIMD1P0DJR0 217 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 USP4Q13107 963 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 FBXO43Q4G163 708 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 HSD17B12Q53GQ0 312 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 FAM76BQ5HYJ3 339 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 ZCCHC12Q6PEW1 402 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 LSM14AQ8ND56 463 aaKnown RBP12.76□□□□□ -0.37
SMC4-202ENST00000357388 SNX33Q8WV41 574 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 SLC38A4Q969I6 547 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 PNMA5Q96PV4 448 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 TUBA1CQ9BQE3 449 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 CORO1BQ9BR76 489 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 ULBP1Q9BZM6 244 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 TNKS2Q9H2K2 1166 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 TMEM27Q9HBJ8 222 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 I3L521 148 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 PAPSS2O95340 614 aaPredicted RBP12.76□□□□□ -0.37
SMC4-202ENST00000357388 FGF1P05230 155 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 SLC35G4P0C7Q5 338 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 PPP3R1P63098 170 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 RAPSNQ13702 412 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 MIIPQ5JXC2 388 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 ZDHHC20Q5W0Z9 365 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 GALNT5Q7Z7M9 940 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 FSTL5Q8N475 847 aaPredicted RBP12.76□□□□□ -0.37
SMC4-202ENST00000357388 STOML3Q8TAV4 291 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 CDCA5Q96FF9 252 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 INPP4AQ96PE3 977 aaPredicted RBP12.76□□□□□ -0.37
SMC4-202ENST00000357388 ZNF347Q96SE7 839 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 CDADC1Q9BWV3 514 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 GLIS2Q9BZE0 524 aaPredicted RBP12.76□□□□□ -0.37
SMC4-202ENST00000357388 KCNQ5Q9NR82 932 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 RGS17Q9UGC6 210 aaPredicted RBP12.76□□□□□ -0.37
SMC4-202ENST00000357388 ZNHIT2Q9UHR6 403 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 ABHD14A-ACY1A0A1B0GW23 586 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 ADH1CP00326 375 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 PSKH1P11801 424 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 CCNB1P14635 433 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 CDKL1Q00532 357 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 SP3Q02447 781 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 GRM3Q14832 879 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 CARTPTQ16568 116 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 OR5K1Q8NHB7 308 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 GRIN3AQ8TCU5 1115 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 GAD1Q99259 594 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 PDGFDQ9GZP0 370 aaPredicted RBP12.76□□□□□ -0.37
SMC4-202ENST00000357388 TMEM134Q9H6X4 195 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 VWA7Q9Y334 891 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 PCDHB9Q9Y5E1 797 aa12.76□□□□□ -0.37
SMC4-202ENST00000357388 MAGI3Q5TCQ9 1506 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms