RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 AKR1D1P51857 326 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 SP4Q02446 784 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CDH18Q13634 790 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CADM3Q8N126 398 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 COLGALT1Q8NBJ5 622 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 SH3YL1Q96HL8 342 aaPredicted RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 TUT1Q9H6E5 874 aaKnown RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 PCDHGA11Q9Y5H2 935 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 LINC00854A0A1B0GVQ3 168 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CLRN2A0PK11 232 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 JRKO75564 520 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 HUNKP57058 714 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 TPRG1LQ5T0D9 272 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 LYPLAL1Q5VWZ2 237 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 TDRD10Q5VZ19 366 aaKnown RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 FSTL4Q6MZW2 842 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 TXNRD3Q86VQ6 643 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 NUDT4Q9NZJ9 180 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CPSF3Q9UKF6 684 aaKnown RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 PRSS51A0A1B0GVH4 220 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 C2orf81A6NN90 581 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 EFCAB9A8MZ26 197 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 GLP2RO95838 553 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 NR3C2P08235 984 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 SOX11P35716 441 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 UBE3AQ05086 875 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 COX10Q12887 443 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF235Q14590 738 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 GOLGA7BQ2TAP0 167 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 FUT11Q495W5 492 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 SLC9B1Q4ZJI4 515 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 SIGIRRQ6IA17 410 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 LCLAT1Q6UWP7 414 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CCDC149Q6ZUS6 474 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 HID1Q8IV36 788 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 PLD5Q8N7P1 536 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 NELL1Q92832 810 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 KIAA1143Q96AT1 154 aaPredicted RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CINPQ9BW66 212 aaPredicted RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 SLC29A3Q9BZD2 475 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 C19orf81C9J6K1 198 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 E5RJQ4 531 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 RFPL1O75677 317 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 SEC14L2O76054 403 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CYP11A1P05108 521 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 PGRP06401 933 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 AVPR1AP37288 418 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CCDC142Q17RM4 750 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 STX12Q86Y82 276 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CABLES1Q8TDN4 633 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 FN3KQ9H479 309 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 ELOVL6Q9H5J4 265 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 MID1IP1Q9NPA3 183 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 PAK1IP1Q9NWT1 392 aaPredicted RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF70Q9UC06 446 aaPredicted RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 DUSP12Q9UNI6 340 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 PCDHGB5Q9Y5G0 923 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 HEMK1Q9Y5R4 338 aaPredicted RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 KCNU1A8MYU2 1149 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 SLC25A11Q02978 314 aaKnown RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 PAMR1Q6UXH9 720 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 NIM1KQ8IY84 436 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 UHRF1Q96T88 793 aaPredicted RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 AGAP2Q99490 1192 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 PRDM8Q9NQV8 689 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 POLE4Q9NR33 117 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 HOXC10Q9NYD6 342 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 A0A1W2PP18 115 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 MSI1O43347 362 aaKnown RBP6.52□□□□□ -1.36
TRIM38-201ENST00000357085 NDUFS3O75489 264 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 GH2P01242 217 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 TSPAN19P0C672 248 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 CKMT2P17540 419 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 PSMA3P25788 255 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 MAPK8P45983 427 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 POLR2JP52435 117 aaKnown RBP6.52□□□□□ -1.36
TRIM38-201ENST00000357085 TEKQ02763 1124 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF484Q5JVG2 852 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 TICAM1Q8IUC6 712 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 SPPL2CQ8IUH8 684 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 RNF139Q8WU17 664 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 HYLS1Q96M11 299 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 NFKBIZQ9BYH8 718 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 DCSTAMPQ9H295 470 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 WDR55Q9H6Y2 383 aaPredicted RBP6.52□□□□□ -1.36
TRIM38-201ENST00000357085 THG1LQ9NWX6 298 aaKnown RBP6.52□□□□□ -1.36
TRIM38-201ENST00000357085 SSR3Q9UNL2 185 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 NUP205Q92621 2012 aa6.52□□□□□ -1.36
TRIM38-201ENST00000357085 WASH4PA8MWX3 477 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 TEX46H3BTG2 121 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 GPR25O00155 361 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ALDH7A1P49419 539 aaKnown RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ATP12AP54707 1039 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 TRAM1Q15629 374 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 SLC36A3Q495N2 470 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 PIK3R6Q5UE93 754 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 NAPRTQ6XQN6 538 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 STRADAQ7RTN6 431 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 METTL3Q86U44 580 aaKnown RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ATG16L2Q8NAA4 619 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms