RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 CYBBP04839 570 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 ALOX12P18054 663 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 POLR2JP52435 117 aaKnown RBP13.51□□□□□ -0.25
TRIM4-203ENST00000355947 HK2P52789 917 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 KCNAB2Q13303 367 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 PAQR3Q6TCH7 311 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 ANKRD46Q86W74 232 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 PHACTR4Q8IZ21 702 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 C2CD4AQ8NCU7 369 aaPredicted RBP13.51□□□□□ -0.25
TRIM4-203ENST00000355947 RAB2BQ8WUD1 216 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 TUBB1Q9H4B7 451 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 PALMDQ9NP74 551 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 EIF2B4Q9UI10 523 aaKnown RBP13.51□□□□□ -0.25
TRIM4-203ENST00000355947 GNPTGQ9UJJ9 305 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 POLR3HQ9Y535 204 aaPredicted RBP13.51□□□□□ -0.25
TRIM4-203ENST00000355947 GLP2RO95838 553 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 CD4P01730 458 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 OR4Q2P0C623 313 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 SLC2A3P11169 496 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 MBL2P11226 248 aaPredicted RBP13.51□□□□□ -0.25
TRIM4-203ENST00000355947 TRIM32Q13049 653 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 SF3B4Q15427 424 aaKnown RBP eCLIP13.51□□□□□ -0.254e-9■■■■■ 33.4
TRIM4-203ENST00000355947 KCNJ8Q15842 424 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 ZNF362Q5T0B9 420 aaPredicted RBP13.51□□□□□ -0.25
TRIM4-203ENST00000355947 INTS11Q5TA45 600 aaKnown RBP13.51□□□□□ -0.25
TRIM4-203ENST00000355947 PAQR9Q6ZVX9 377 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 CALML6Q8TD86 181 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 RSPH1Q8WYR4 309 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 TOP1MTQ969P6 601 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 MRGPRX2Q96LB1 330 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 NODALQ96S42 347 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 APOL5Q9BWW9 433 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 RERGLQ9H628 205 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 HPS4Q9NQG7 708 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 ARID2Q68CP9 1835 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 QSER1Q2KHR3 1735 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 AXIN1O15169 862 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 HSMCR30P0CW71 290 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 EFNA1P20827 205 aaPredicted RBP13.51□□□□□ -0.25
TRIM4-203ENST00000355947 DAG1Q14118 895 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 PSMD5Q16401 504 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 C18orf21Q32NC0 220 aaPredicted RBP13.51□□□□□ -0.25
TRIM4-203ENST00000355947 COLEC12Q5KU26 742 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 ANKS6Q68DC2 871 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 C14orf80Q86SX3 495 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 DCP1BQ8IZD4 617 aaKnown RBP13.51□□□□□ -0.25
TRIM4-203ENST00000355947 CRYBG2Q8N1P7 616 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 MFSD2AQ8NA29 543 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 METTL6Q8TCB7 284 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 TMEM125Q96AQ2 219 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 FEM1CQ96JP0 617 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 PAAF1Q9BRP4 392 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 ENTPD7Q9NQZ7 604 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 ADGRE2Q9UHX3 823 aa13.51□□□□□ -0.25
TRIM4-203ENST00000355947 SH3BGRLO75368 114 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 B3GAT3O94766 335 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 POMCP01189 267 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 GPIP06744 558 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 SLC2A4P14672 509 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 GTF2E2P29084 291 aaKnown RBP13.5□□□□□ -0.25
TRIM4-203ENST00000355947 GRIK1P39086 918 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 CLCN5P51795 746 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 HERVK_113P63132 956 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 CD47Q08722 323 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 ZNF846Q147U1 533 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 ACAP2Q15057 778 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 DENND5AQ6IQ26 1287 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 GATAD2AQ86YP4 633 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 SPARTQ8N0X7 666 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 LRRC52Q8N7C0 313 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 ARRDC4Q8NCT1 418 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 ZNF420Q8TAQ5 688 aaPredicted RBP13.5□□□□□ -0.25
TRIM4-203ENST00000355947 MCOLN3Q8TDD5 553 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 CHPT1Q8WUD6 406 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 SH3YL1Q96HL8 342 aaPredicted RBP13.5□□□□□ -0.25
TRIM4-203ENST00000355947 VAT1Q99536 393 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 ERVK-6Q9BXR3 956 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 EHD1Q9H4M9 534 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 HACD3Q9P035 362 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 AFF4Q9UHB7 1163 aaKnown RBP13.5□□□□□ -0.25
TRIM4-203ENST00000355947 ZNHIT2Q9UHR6 403 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 PTBP2Q9UKA9 531 aaKnown RBP13.5□□□□□ -0.25
TRIM4-203ENST00000355947 ADAMTS5Q9UNA0 930 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 ACTL7AQ9Y615 435 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 AQP9O43315 295 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 NDUFS2O75306 463 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 ABCB1P08183 1280 aaPredicted RBP13.5□□□□□ -0.25
TRIM4-203ENST00000355947 BRCC3P46736 316 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 FSCN1Q16658 493 aaKnown RBP13.5□□□□□ -0.25
TRIM4-203ENST00000355947 DCAF4L1Q3SXM0 396 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 TAS2R42Q7RTR8 314 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 DEFB132Q7Z7B7 95 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 DTWD1Q8N5C7 304 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 OR6J1Q8NGC5 347 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 TMEM40Q8WWA1 233 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 TRUB1Q8WWH5 349 aaKnown RBP13.5□□□□□ -0.25
TRIM4-203ENST00000355947 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.5□□□□□ -0.25
TRIM4-203ENST00000355947 TUBA8Q9NY65 449 aaPredicted RBP13.5□□□□□ -0.25
TRIM4-203ENST00000355947 PIM2Q9P1W9 311 aa13.5□□□□□ -0.25
TRIM4-203ENST00000355947 FAM8A1Q9UBU6 413 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms