RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 SNX2O60749 519 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 CDK14O94921 469 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 ITGALP20701 1170 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 ARHGAP8P85298 464 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 DNAJC3Q13217 504 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 ITGA9Q13797 1035 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 SYDE1Q6ZW31 735 aaPredicted RBP13.07□□□□□ -0.32
TUBD1-202ENST00000340993 SERPINA9Q86WD7 417 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 UNC5BQ8IZJ1 945 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 SGF29Q96ES7 293 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 ERP44Q9BS26 406 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 SPASTQ9UBP0 616 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 GULP1Q9UBP9 304 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 CHMP2BQ9UQN3 213 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 UTP11Q9Y3A2 253 aaKnown RBP13.07□□□□□ -0.32
TUBD1-202ENST00000340993 ST14Q9Y5Y6 855 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 SIGLEC6O43699 453 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 FOXD2O60548 495 aaPredicted RBP13.06□□□□□ -0.32
TUBD1-202ENST00000340993 VAPBO95292 243 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 PYGLP06737 847 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 MSH3P20585 1137 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 MAGEA6P43360 314 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 RXRGP48443 463 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 NPY2RP49146 381 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 NOVA1P51513 510 aaKnown RBP13.06□□□□□ -0.32
TUBD1-202ENST00000340993 CTSCP53634 463 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 CDK16Q00536 496 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 GUCY2DQ02846 1103 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 SEMA3AQ14563 771 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 SUZ12Q15022 739 aaKnown RBP13.06□□□□□ -0.32
TUBD1-202ENST00000340993 HIBCHQ6NVY1 386 aaPredicted RBP13.06□□□□□ -0.32
TUBD1-202ENST00000340993 ZNF572Q7Z3I7 529 aaPredicted RBP13.06□□□□□ -0.32
TUBD1-202ENST00000340993 CCDC25Q86WR0 208 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 OR2M4Q96R27 311 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 XAB2Q9HCS7 855 aaKnown RBP13.06□□□□□ -0.32
TUBD1-202ENST00000340993 APPL1Q9UKG1 709 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 SLC17A4Q9Y2C5 497 aa13.06□□□□□ -0.32
TUBD1-202ENST00000340993 FAM187AA6NFU0 413 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 SDR42E2A6NKP2 422 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 TOR1BO14657 336 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 SLC30A4O14863 429 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 YY2O15391 372 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 GRID2O43424 1007 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 OR1I1O60431 355 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 DNAJC6O75061 913 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 PPFIA2O75334 1257 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 TUBB4AP04350 444 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 ITGB6P18564 788 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 ACTR1BP42025 376 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 BLKP51451 505 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 PLTPP55058 493 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 ACTR1AP61163 376 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 CTBSQ01459 385 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 TMEM115Q12893 351 aaPredicted RBP13.05□□□□□ -0.32
TUBD1-202ENST00000340993 GTF2H3Q13889 308 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 FASTKD3Q14CZ7 662 aaKnown RBP13.05□□□□□ -0.32
TUBD1-202ENST00000340993 INSCQ1MX18 579 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 ZDHHC20Q5W0Z9 365 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 SNX20Q7Z614 316 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 PCGF5Q86SE9 256 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 IGDCC3Q8IVU1 814 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 RASGEF1AQ8N9B8 481 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 MCUQ8NE86 351 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 MNS1Q8NEH6 495 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 FAM46DQ8NEK8 389 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 PATE1Q8WXA2 126 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 DCUN1D1Q96GG9 259 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 FCRL3Q96P31 734 aaPredicted RBP13.05□□□□□ -0.32
TUBD1-202ENST00000340993 CDH19Q9H159 772 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 DPEP2Q9H4A9 486 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 TRIM39Q9HCM9 518 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 MARCH4Q9P2E8 410 aaPredicted RBP13.05□□□□□ -0.32
TUBD1-202ENST00000340993 SOX13Q9UN79 622 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 RPS6KL1Q9Y6S9 549 aa13.05□□□□□ -0.32
TUBD1-202ENST00000340993 CASC3O15234 703 aaKnown RBP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 DFNA5O60443 496 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 ANXA6P08133 673 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 RHOXF2BP0C7M4 288 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 TEAD1P28347 426 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 ELK3P41970 407 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 GRK6P43250 576 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 CLDN6P56747 220 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 B4GALNT1Q00973 533 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 CALCOCO2Q13137 446 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 MORF4L2Q15014 288 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 DBN1Q16643 649 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 HIF1AQ16665 826 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 PYCR3Q53H96 274 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 FASTKD1Q53R41 847 aaKnown RBP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 TMEM220Q6QAJ8 160 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 AFTPHQ6ULP2 937 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 NAPRTQ6XQN6 538 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 SPNS2Q8IVW8 549 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 NXPE1Q8N323 547 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 CLDN19Q8N6F1 224 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 OR4L1Q8NH43 312 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 STAMBPL1Q96FJ0 436 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 CNDP2Q96KP4 475 aaKnown RBP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 RANBP9Q96S59 729 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 RHOXF2Q9BQY4 288 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms