RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 BRINP2Q9C0B6 783 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 VIPAS39Q9H9C1 493 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 E9PBE3 544 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 KLHL41O60662 606 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 PRAMEF11O60813 436 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 SIN3BO75182 1162 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 POP7O75817 140 aaKnown RBP12.72□□□□□ -0.37
LIN54-201ENST00000340417 TYRP1P17643 537 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 TFE3P19532 575 aaPredicted RBP12.72□□□□□ -0.37
LIN54-201ENST00000340417 RPL10P27635 214 aaKnown RBP12.72□□□□□ -0.37
LIN54-201ENST00000340417 GSTA3Q16772 222 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 C16orf62Q7Z3J2 963 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 MCEMP1Q8IX19 187 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 CDYL2Q8N8U2 506 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 GFM2Q969S9 779 aaKnown RBP12.72□□□□□ -0.37
LIN54-201ENST00000340417 CCM2Q9BSQ5 444 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 CAAP1Q9H8G2 361 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 ACTR5Q9H9F9 607 aaPredicted RBP12.72□□□□□ -0.37
LIN54-201ENST00000340417 ZNF682O95780 498 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 OC90Q02509 493 aaPredicted RBP12.72□□□□□ -0.37
LIN54-201ENST00000340417 MGAT3Q09327 533 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 DSC3Q14574 896 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 AGKQ53H12 422 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 DPY19L3Q6ZPD9 716 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 FCRL5Q96RD9 977 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 B4GALT6Q9UBX8 382 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 SERTAD3Q9UJW9 196 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 H3BNH8 94 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 MUSKO15146 869 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 HOXD13P35453 343 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 NUDT2P50583 147 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 CHRNA6Q15825 494 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 NYAP1Q6ZVC0 841 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 ALG3Q92685 438 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 SORCS3Q9UPU3 1222 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.71□□□□□ -0.37
LIN54-201ENST00000340417 RCCD1A6NED2 376 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 GRID2O43424 1007 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 HSD17B2P37059 387 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 SERINC3Q13530 473 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 DUSP6Q16828 381 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 PIK3R6Q5UE93 754 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 HGSNATQ68CP4 663 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 HIBCHQ6NVY1 386 aaPredicted RBP12.71□□□□□ -0.37
LIN54-201ENST00000340417 GPR149Q86SP6 731 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 CLEC4FQ8N1N0 589 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 NIPA2Q8N8Q9 360 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 TERB1Q8NA31 727 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 SHKBP1Q8TBC3 707 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 KBTBD7Q8WVZ9 684 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 ESR1P03372 595 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 ITGA2BP08514 1039 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 NT5EP21589 574 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 TNK2Q07912 1038 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 ALFQ53S48 1182 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 UNC5BQ8IZJ1 945 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 B4GALNT2Q8NHY0 566 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 DENND1AQ8TEH3 1009 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 OR2M4Q96R27 311 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 SLC46A2Q9BY10 475 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 POLR1DQ9Y2S0 133 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 PRKAB1Q9Y478 270 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 CFAP20Q9Y6A4 193 aaKnown RBP12.71□□□□□ -0.37
LIN54-201ENST00000340417 PHIPQ8WWQ0 1821 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 ZNF542PQ5EBM4 170 aa12.71□□□□□ -0.37
LIN54-201ENST00000340417 DMGDHQ9UI17 866 aaKnown RBP12.71□□□□□ -0.37
LIN54-201ENST00000340417 AJAP1Q9UKB5 411 aaPredicted RBP12.71□□□□□ -0.37
LIN54-201ENST00000340417 FAM237BA0A1B0GVD1 139 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 SDC3O75056 442 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 C8GP07360 202 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 ELOAQ14241 798 aaKnown RBP12.71□□□□□ -0.38
LIN54-201ENST00000340417 DNAL1Q4LDG9 190 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 TANGO2Q6ICL3 276 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 KYAT3Q6YP21 454 aaKnown RBP12.71□□□□□ -0.38
LIN54-201ENST00000340417 MFSD6LQ8IWD5 586 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 MDM1Q8TC05 714 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 CEP44Q9C0F1 390 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 RHOJQ9H4E5 214 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 MTF2Q9Y483 593 aaPredicted RBP12.71□□□□□ -0.38
LIN54-201ENST00000340417 CCDC154A6NI56 674 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 CER1O95813 267 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 CHRNA4P43681 627 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 AQP5P55064 265 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 DMWDQ09019 674 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 KIAA1161Q6NSJ0 714 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 DNAJC14Q6Y2X3 702 aaPredicted RBP12.71□□□□□ -0.38
LIN54-201ENST00000340417 SCAIQ8N9R8 606 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 TCP10LQ8TDR4 215 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 TADA1Q96BN2 335 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 TCF12Q99081 682 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 CCDC90BQ9GZT6 254 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 HAPLN2Q9GZV7 340 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 FZD3Q9NPG1 666 aa12.71□□□□□ -0.38
LIN54-201ENST00000340417 SUCOQ9UBS9 1254 aaKnown RBP12.71□□□□□ -0.38
LIN54-201ENST00000340417 TMEM150CB9EJG8 249 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 THEGLP0DJG4 465 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 TSHRP16473 764 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 HNF1BP35680 557 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 CCDC142Q17RM4 750 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 GPAT3Q53EU6 434 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms