RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 LGR4Q9BXB1 951 aa17.7■□□□□ 0.42
SDCBP2-201ENST00000339987 ZCCHC2Q9C0B9 1178 aaKnown RBP17.7■□□□□ 0.42
SDCBP2-201ENST00000339987 TRIM39Q9HCM9 518 aa17.7■□□□□ 0.42
SDCBP2-201ENST00000339987 TM9SF3Q9HD45 589 aa17.7■□□□□ 0.42
SDCBP2-201ENST00000339987 FBXO6Q9NRD1 293 aaPredicted RBP17.7■□□□□ 0.42
SDCBP2-201ENST00000339987 AASDHPPTQ9NRN7 309 aa17.7■□□□□ 0.42
SDCBP2-201ENST00000339987 GPR27Q9NS67 375 aa17.7■□□□□ 0.42
SDCBP2-201ENST00000339987 OAS3Q9Y6K5 1087 aaKnown RBP17.7■□□□□ 0.42
SDCBP2-201ENST00000339987 SLCO1B1Q9Y6L6 691 aa17.7■□□□□ 0.42
SDCBP2-201ENST00000339987 TNRC6BQ9UPQ9 1833 aaKnown RBP17.7■□□□□ 0.42
SDCBP2-201ENST00000339987 VEGFDO43915 354 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 TCEA3O75764 348 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 AHSGP02765 367 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 SHBGP04278 402 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 RALBP11234 206 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 KELP23276 732 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 RPS3P23396 243 aaKnown RBP eCLIP17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 GABRB3P28472 473 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 CD38P28907 300 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 AKT1P31749 480 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 DPP6P42658 865 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 NSG1P42857 185 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 CD151P48509 253 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 B4GALNT1Q00973 533 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 NFATC4Q14934 902 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 KHDC1Q4VXA5 237 aaKnown RBP17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 PEAR1Q5VY43 1037 aaPredicted RBP17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 Q6ZSR6 202 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 STRA8Q7Z7C7 330 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 TRIM74Q86UV6 250 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 DCP2Q8IU60 420 aaKnown RBP17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 IQCKQ8N0W5 287 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 PNPLA1Q8N8W4 532 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 DCUN1D1Q96GG9 259 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 DHRS4Q9BTZ2 278 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 MIR1-1HGQ9H1L0 117 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 TXNDC16Q9P2K2 825 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 SLC24A2Q9UI40 661 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 CORO1CQ9ULV4 474 aaPredicted RBP17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 SPAG17Q6Q759 2223 aa17.69■□□□□ 0.42
SDCBP2-201ENST00000339987 GPR89AB7ZAQ6 455 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 PRMT5O14744 637 aaPredicted RBP17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 BCAT2O15382 392 aaPredicted RBP17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 IVLP07476 585 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 GPR89BP0CG08 455 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 MSH3P20585 1137 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 ITPKAP23677 461 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 HTR1BP28222 390 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 TMEM115Q12893 351 aaPredicted RBP17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 ZNF789Q5FWF6 425 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 GRTP1Q5TC63 336 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 ADGRG6Q86SQ4 1221 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 OR13H1Q8NG92 308 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 ANKRD7Q92527 254 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 KLHDC7BQ96G42 594 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 PAFAH2Q99487 392 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 BOCQ9BWV1 1114 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 P2RY12Q9H244 342 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 RHOJQ9H4E5 214 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 SUSD2Q9UGT4 822 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 ZNF180Q9UJW8 692 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 PLAAQ9Y263 795 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 SLC17A4Q9Y2C5 497 aa17.68■□□□□ 0.42
SDCBP2-201ENST00000339987 PRR5-ARHGAP8B1AHC4 643 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 POC1B-GALNT4F8VUJ3 575 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 OR1I1O60431 355 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 MAGEC1O60732 1142 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 MTX2O75431 263 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 HAUS5O94927 633 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 AP2A2O94973 939 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 ESR1P03372 595 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 INHBAP08476 426 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 THEGLP0DJG4 465 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 ATP1B2P14415 290 aaPredicted RBP17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 HOXD12P35452 270 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 MSH2P43246 934 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 THOP1P52888 689 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 EIF3BP55884 814 aaKnown RBP17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 GTF2H3Q13889 308 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 CASP8Q14790 479 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 CNSTQ6PJW8 725 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 MACC1Q6ZN28 852 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 ZC3HC1Q86WB0 502 aaKnown RBP17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 TDRPQ86YL5 185 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 CNPY4Q8N129 248 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 CCDC97Q96F63 343 aaPredicted RBP17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 LOXL4Q96JB6 756 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 WDR92Q96MX6 357 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 RBBP8Q99708 897 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 TMEM109Q9BVC6 243 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 CLPBQ9H078 707 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 RMI1Q9H9A7 625 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 ATXN10Q9UBB4 475 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 PILRBQ9UKJ0 227 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 PCDHB1Q9Y5F3 818 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 NFS1Q9Y697 457 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 COMMD10Q9Y6G5 202 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 IKBKGQ9Y6K9 419 aa17.67■□□□□ 0.42
SDCBP2-201ENST00000339987 A0A1B0GTW7 788 aa17.66■□□□□ 0.42
SDCBP2-201ENST00000339987 UBA6A0AVT1 1052 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms