RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 CAVIN3Q969G5 261 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 PSKH2Q96QS6 385 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 PHF7Q9BWX1 381 aaPredicted RBP14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 SOX13Q9UN79 622 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 HCN4Q9Y3Q4 1203 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 TMEM265A0A087WTH1 108 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 OTCP00480 354 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 NTRK1P04629 796 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 LSP1P33241 339 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 TTC27Q6P3X3 843 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 RGS9BPQ6ZS82 235 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 GKN2Q86XP6 184 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 RASGEF1CQ8N431 466 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 FIBINQ8TAL6 211 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 NCSTNQ92542 709 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 LRIG1Q96JA1 1093 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 AARSD1Q9BTE6 412 aaKnown RBP14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 PHACTR1Q9C0D0 580 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 TMBIM4Q9HC24 238 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 PCDHB11Q9Y5F2 797 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 LAMP2P13473 410 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 PFKLP17858 780 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 GALK1P51570 392 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 PRKAA2P54646 552 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 PAFAH1B3Q15102 231 aaKnown RBP14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 INO80DQ53TQ3 878 aaPredicted RBP14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 ZNF621Q6ZSS3 439 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 KIAA0408Q6ZU52 694 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 GPR149Q86SP6 731 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 NPAS3Q8IXF0 933 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 GJD3Q8N144 294 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 GFM2Q969S9 779 aaKnown RBP14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 RAB7BQ96AH8 199 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 ZNF641Q96N77 438 aaPredicted RBP14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 THTPAQ9BU02 230 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 CFHR5Q9BXR6 569 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 YY1AP1Q9H869 796 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 RPS6KB2Q9UBS0 482 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 LILRB3O75022 631 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 MLYCDO95822 493 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 TYRP1P17643 537 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 EEF1DP29692 281 aaKnown RBP14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 CSTF2P33240 577 aaKnown RBP eCLIP14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 S100A3P33764 101 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 GJA4P35212 333 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 GCKP35557 465 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 STX4Q12846 297 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 EMC10Q5UCC4 262 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 GPRIN3Q6ZVF9 776 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 Q7L0L9 218 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 LRRC34Q8IZ02 419 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 DCBLD1Q8N8Z6 715 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 MCCC1Q96RQ3 725 aaPredicted RBP14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 PCDH12Q9NPG4 1184 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 DNAJC11Q9NVH1 559 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 CABIN1Q9Y6J0 2220 aa14.29□□□□□ -0.12
SYNGR1-203ENST00000328933 COL5A3P25940 1745 aaPredicted RBP14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 GRID2O43424 1007 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 HS6ST1O60243 411 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 FYNP06241 537 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 GLDCP23378 1020 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 ADAM17P78536 824 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 INPP5AQ14642 412 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 ZNF783Q6ZMS7 281 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 UMODL1-AS1Q8N2C9 162 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 LINC01465Q8N7H1 131 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 ZCCHC10Q8TBK6 192 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 PIF1Q9H611 641 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 FZD3Q9NPG1 666 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 KLHL28Q9NXS3 571 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 BCORQ6W2J9 1755 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 NUMA1Q14980 2115 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 GRIA1P42261 906 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 ZBTB17Q13105 803 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 PM20D1Q6GTS8 502 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 MFSD6LQ8IWD5 586 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 SLC35B2Q8TB61 432 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 CATSPER2Q96P56 530 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 DPYSL5Q9BPU6 564 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 LRRC4CQ9HCJ2 640 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 ZDHHC3Q9NYG2 299 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 TSPAN6O43657 245 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 TPST1O60507 370 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 OXTRP30559 389 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 HPCAL1P37235 193 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 CENPAP49450 140 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 ZNHIT3Q15649 155 aaPredicted RBP14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 GAREM2Q75VX8 874 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 FAM120BQ96EK7 910 aaKnown RBP14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 PLEKHA8Q96JA3 519 aa14.28□□□□□ -0.12
SYNGR1-203ENST00000328933 IGLON5A6NGN9 336 aa14.27□□□□□ -0.12
SYNGR1-203ENST00000328933 WASH3PC4AMC7 463 aa14.27□□□□□ -0.12
SYNGR1-203ENST00000328933 JMJD7P0C870 316 aa14.27□□□□□ -0.12
SYNGR1-203ENST00000328933 HNRNPLP14866 589 aaKnown RBP eCLIP14.27□□□□□ -0.12
SYNGR1-203ENST00000328933 CAPZA2P47755 286 aa14.27□□□□□ -0.12
SYNGR1-203ENST00000328933 SIM2Q14190 667 aaPredicted RBP14.27□□□□□ -0.12
SYNGR1-203ENST00000328933 FAM109BQ6ICB4 259 aaPredicted RBP14.27□□□□□ -0.12
SYNGR1-203ENST00000328933 RALGPS2Q86X27 583 aaPredicted RBP14.27□□□□□ -0.12
SYNGR1-203ENST00000328933 OR2T3Q8NH03 318 aa14.27□□□□□ -0.12
SYNGR1-203ENST00000328933 PRICKLE1Q96MT3 831 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms