RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CYP1B1Q16678 543 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 ZCCHC8Q6NZY4 707 aaKnown RBP11.9□□□□□ -0.5
SCFD1-201ENST00000311943 FAM83HQ6ZRV2 1179 aaPredicted RBP11.9□□□□□ -0.5
SCFD1-201ENST00000311943 NLRP8Q86W28 1048 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 CLDN19Q8N6F1 224 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 OR13J1Q8NGT2 312 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 ZNF398Q8TD17 642 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 CPT1BQ92523 772 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 CNTNAP3BQ96NU0 1288 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 NAPGQ99747 312 aaPredicted RBP11.9□□□□□ -0.5
SCFD1-201ENST00000311943 ZSCAN5AQ9BUG6 496 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 CNTNAP3Q9BZ76 1288 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 SYNDIG1Q9H7V2 258 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 RDH14Q9HBH5 336 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 TRIM39Q9HCM9 518 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 CASS4Q9NQ75 786 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 PAK5Q9P286 719 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 ATXN7L1Q9ULK2 861 aaPredicted RBP11.9□□□□□ -0.5
SCFD1-201ENST00000311943 WDR37Q9Y2I8 494 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 PKP3Q9Y446 797 aa11.9□□□□□ -0.5
SCFD1-201ENST00000311943 ZFC3H1O60293 1989 aaKnown RBP11.9□□□□□ -0.5
SCFD1-201ENST00000311943 A0A1W2PNU3 283 aaPredicted RBP11.89□□□□□ -0.51
SCFD1-201ENST00000311943 A0A1W2PQM1 296 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 EME2A4GXA9 379 aaPredicted RBP11.89□□□□□ -0.51
SCFD1-201ENST00000311943 TOR1BO14657 336 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 PPM1DO15297 605 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 SUN1O94901 812 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 IVLP07476 585 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 KELP23276 732 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 ACP1P24666 158 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 MGAT1P26572 445 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 NMBRP28336 390 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 BLKP51451 505 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 TARDBPQ13148 414 aaKnown RBP eCLIP11.89□□□□□ -0.51
SCFD1-201ENST00000311943 HES3Q5TGS1 186 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 PPP1R21Q6ZMI0 780 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 GALNT13Q8IUC8 556 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 SDR16C5Q8N3Y7 309 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 GPR156Q8NFN8 814 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 ATL2Q8NHH9 583 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 JPH3Q8WXH2 748 aaPredicted RBP11.89□□□□□ -0.51
SCFD1-201ENST00000311943 CCDC74AQ96AQ1 378 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 CDKN2AIPNLQ96HQ2 116 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 C16orf45Q96MC5 204 aaPredicted RBP11.89□□□□□ -0.51
SCFD1-201ENST00000311943 PLEKHG4BQ96PX9 1271 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 TRIM51Q9BSJ1 452 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 TMEM121BQ9BXQ6 578 aaPredicted RBP11.89□□□□□ -0.51
SCFD1-201ENST00000311943 TRABDQ9H4I3 376 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 KLC4Q9NSK0 619 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 PADI4Q9UM07 663 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 PRSS21Q9Y6M0 314 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 CSNK1G3Q9Y6M4 447 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 IGF2RP11717 2491 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 CCDC162PA2VCL2 907 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 MROH6A6NGR9 719 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 C2orf81A6NN90 581 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 PHF2O75151 1096 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 BRAFP15056 766 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 MPSTP25325 297 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 TEAD1P28347 426 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 PTGIRP43119 386 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 NFATC2Q13469 925 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 FNBP1LQ5T0N5 605 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 NKAIN2Q5VXU1 208 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 B3GNT8Q7Z7M8 397 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 FAM181AQ8N9Y4 354 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
SCFD1-201ENST00000311943 ZDHHC1Q8WTX9 485 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 RNF31Q96EP0 1072 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 MFSD3Q96ES6 412 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 CCDC3Q9BQI4 270 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 FRMD8P1Q9BZ68 369 aaPredicted RBP11.89□□□□□ -0.51
SCFD1-201ENST00000311943 FOXP3Q9BZS1 431 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 OSGEPL1Q9H4B0 414 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 SYBUQ9NX95 663 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 HACD3Q9P035 362 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 MARCH4Q9P2E8 410 aaPredicted RBP11.89□□□□□ -0.51
SCFD1-201ENST00000311943 PSMD13Q9UNM6 376 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 SAR1BQ9Y6B6 198 aa11.89□□□□□ -0.51
SCFD1-201ENST00000311943 ZNF106Q9H2Y7 1883 aaKnown RBP11.89□□□□□ -0.51
SCFD1-201ENST00000311943 KIF26BQ2KJY2 2108 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 OR52A4PA6NMU1 304 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 TPP1O14773 563 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 OR1I1O60431 355 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 FDFT1P37268 417 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 PDX1P52945 283 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 NFE2L1Q14494 772 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 KCNJ11Q14654 390 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 ZRANB3Q5FWF4 1079 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 HP1BP3Q5SSJ5 553 aaPredicted RBP11.88□□□□□ -0.51
SCFD1-201ENST00000311943 CAND1Q86VP6 1230 aaKnown RBP11.88□□□□□ -0.51
SCFD1-201ENST00000311943 GKN2Q86XP6 184 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 TRAPPC5Q8IUR0 188 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 PHYKPLQ8IUZ5 450 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 ARL14Q8N4G2 192 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 HDAC10Q969S8 669 aa11.88□□□□□ -0.51
SCFD1-201ENST00000311943 TRNAU1APQ9NX07 287 aaKnown RBP11.88□□□□□ -0.51
SCFD1-201ENST00000311943 APOBEC2Q9Y235 224 aaKnown RBP11.88□□□□□ -0.51
SCFD1-201ENST00000311943 CFAP20Q9Y6A4 193 aaKnown RBP11.88□□□□□ -0.51
SCFD1-201ENST00000311943 TPRP12270 2363 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms