RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 SPARTQ8N0X7 666 aa11.07□□□□□ -0.64
PTPN7-201ENST00000309017 LINC01465Q8N7H1 131 aa11.07□□□□□ -0.64
PTPN7-201ENST00000309017 SH3RF2Q8TEC5 729 aa11.07□□□□□ -0.64
PTPN7-201ENST00000309017 RORBQ92753 470 aa11.07□□□□□ -0.64
PTPN7-201ENST00000309017 ITPKCQ96DU7 683 aa11.07□□□□□ -0.64
PTPN7-201ENST00000309017 SH3YL1Q96HL8 342 aaPredicted RBP11.07□□□□□ -0.64
PTPN7-201ENST00000309017 NODALQ96S42 347 aa11.07□□□□□ -0.64
PTPN7-201ENST00000309017 LRRC3Q9BY71 257 aa11.07□□□□□ -0.64
PTPN7-201ENST00000309017 TUBB1Q9H4B7 451 aa11.07□□□□□ -0.64
PTPN7-201ENST00000309017 MRM3Q9HC36 420 aaKnown RBP11.07□□□□□ -0.64
PTPN7-201ENST00000309017 RBPJLQ9UBG7 517 aa11.07□□□□□ -0.64
PTPN7-201ENST00000309017 MAGEL2Q9UJ55 1249 aa11.07□□□□□ -0.64
PTPN7-201ENST00000309017 PCDHB3Q9Y5E6 796 aa11.07□□□□□ -0.64
PTPN7-201ENST00000309017 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-201ENST00000309017 SOBPA7XYQ1 873 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 BTN3A1O00481 513 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 SEC14L2O76054 403 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 CNTN5O94779 1100 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 CPNE6O95741 557 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 CDH1P12830 882 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 DARSP14868 501 aaKnown RBP11.06□□□□□ -0.64
PTPN7-201ENST00000309017 CD1DP15813 335 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 AXLP30530 894 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 FMO4P31512 558 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 RENBPP51606 427 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 TPTEP56180 551 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 BTG3Q14201 252 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-201ENST00000309017 KIAA2013Q8IYS2 634 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 SCAIQ8N9R8 606 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 STAG3L4Q8TBR4 150 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 C16orf70Q9BSU1 422 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 CD274Q9NZQ7 290 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 PCDHGA8Q9Y5G5 932 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 PCDHGA11Q9Y5H2 935 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 CASTOR2A6NHX0 329 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 CD3EAPO15446 510 aaKnown RBP11.06□□□□□ -0.64
PTPN7-201ENST00000309017 SLC7A4O43246 635 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 INMTO95050 263 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 MATN4O95460 622 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 S1PR4O95977 384 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 CRHBPP24387 322 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 GJA8P48165 433 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 TSNQ15631 228 aaKnown RBP11.06□□□□□ -0.64
PTPN7-201ENST00000309017 RBM48Q5RL73 367 aaKnown RBP11.06□□□□□ -0.64
PTPN7-201ENST00000309017 ZMIZ2Q8NF64 920 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 PSMA8Q8TAA3 256 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 IPPQ9Y573 584 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 LTBP4Q8N2S1 1624 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 COL1A2P08123 1366 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 DYTNA2CJ06 578 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 NDUFS2O75306 463 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 AGXTP21549 392 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 PRKACGP22612 351 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 LHX1P48742 406 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 NR6A1Q15406 480 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 C6orf141Q5SZD1 244 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 SPATA19Q7Z5L4 167 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 DPP9Q86TI2 863 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 PLD3Q8IV08 490 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 SCN4BQ8IWT1 228 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 ABI1Q8IZP0 508 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 SCAMP5Q8TAC9 235 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 HASPINQ8TF76 798 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 MYLPFQ96A32 169 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 ALPK1Q96QP1 1244 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 CSF3RQ99062 836 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 SLC25A51Q9H1U9 297 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 TMEM30AQ9NV96 361 aa11.06□□□□□ -0.64
PTPN7-201ENST00000309017 FAM32AQ9Y421 112 aaKnown RBP11.06□□□□□ -0.64
PTPN7-201ENST00000309017 ADM5C9JUS6 153 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 ENPP3O14638 875 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 FGF10O15520 208 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-201ENST00000309017 SOAT2O75908 522 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 GOT2P00505 430 aaKnown RBP11.05□□□□□ -0.64
PTPN7-201ENST00000309017 RAP2AP10114 183 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 GSTM2P28161 218 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 PRDX3P30048 256 aaKnown RBP11.05□□□□□ -0.64
PTPN7-201ENST00000309017 ADRA1AP35348 466 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 RAD51Q06609 339 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 MAPRE1Q15691 268 aaKnown RBP11.05□□□□□ -0.64
PTPN7-201ENST00000309017 DGUOKQ16854 277 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 C6orf183Q5T699 404 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 PM20D1Q6GTS8 502 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 BNIPLQ7Z465 357 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 TMEM199Q8N511 208 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 OR13J1Q8NGT2 312 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 ZFP90Q8TF47 636 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 HTRA1Q92743 480 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 UGT2B28Q9BY64 529 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 NOL6Q9H6R4 1146 aaKnown RBP11.05□□□□□ -0.64
PTPN7-201ENST00000309017 GPN2Q9H9Y4 310 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-201ENST00000309017 ABCB10Q9NRK6 738 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.05□□□□□ -0.649e-7■□□□□ 9.5
PTPN7-201ENST00000309017 VPS51Q9UID3 782 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 GPR45Q9Y5Y3 372 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 DOCK1Q14185 1865 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 RLFQ13129 1914 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 A0A1B0GTL3 188 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 XPNPEP2O43895 674 aa11.05□□□□□ -0.64
PTPN7-201ENST00000309017 NDUFS3O75489 264 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms