RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 SLC10A3P09131 477 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 L1CAMP32004 1257 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 SOX6P35712 828 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 ZNF135P52742 658 aaPredicted RBP13.35□□□□□ -0.27
HPS3-201ENST00000296051 TPTEP56180 551 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 C12orf43Q96C57 262 aaKnown RBP13.35□□□□□ -0.27
HPS3-201ENST00000296051 DEPDC7Q96QD5 511 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 EPS8L2Q9H6S3 715 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 GMPPBQ9Y5P6 360 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 TLL2Q9Y6L7 1015 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 SQORQ9Y6N5 450 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 LAMA4Q16363 1823 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 CACNB4O00305 520 aaPredicted RBP13.35□□□□□ -0.27
HPS3-201ENST00000296051 TRIM24O15164 1050 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 LRATO95237 230 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 SIX3O95343 332 aaPredicted RBP13.35□□□□□ -0.27
HPS3-201ENST00000296051 CYP4F8P98187 520 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 LINGO4Q6UY18 593 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 PARGQ86W56 976 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 HERVK_113Q902F9 699 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 C3orf18Q9UK00 162 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 LMO7Q8WWI1 1683 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 ROBO1Q9Y6N7 1651 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 CACNA1GO43497 2377 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 ISM1B1AKI9 464 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 SLC31A1O15431 190 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 NOBOXO60393 691 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 RECQL5O94762 991 aaPredicted RBP13.35□□□□□ -0.27
HPS3-201ENST00000296051 GALNT3Q14435 633 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 TOMM20Q15388 145 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 CRY1Q16526 586 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 SLC10A6Q3KNW5 377 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 PRR23BQ6ZRT6 265 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 CHMP1BQ7LBR1 199 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 NIPA2Q8N8Q9 360 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 RDH11Q8TC12 318 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 ITFG2Q969R8 447 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 PCED1BQ96HM7 432 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 C1orf21Q9H246 121 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 EHD3Q9NZN3 535 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 CITO14578 2027 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 FADS2O95864 444 aaKnown RBP13.34□□□□□ -0.27
HPS3-201ENST00000296051 KRT6AP02538 564 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 KRT6BP04259 564 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 ZNF182P17025 639 aaPredicted RBP13.34□□□□□ -0.27
HPS3-201ENST00000296051 MAT2AP31153 395 aaKnown RBP13.34□□□□□ -0.27
HPS3-201ENST00000296051 KRT6CP48668 564 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 SLC16A1P53985 500 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 ZNF252P-AS1Q0IIN9 211 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 CBX2Q14781 532 aaPredicted RBP13.34□□□□□ -0.27
HPS3-201ENST00000296051 CNSTQ6PJW8 725 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 ERI1Q8IV48 349 aaKnown RBP13.34□□□□□ -0.27
HPS3-201ENST00000296051 WDTC1Q8N5D0 677 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 TRIB2Q92519 343 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 TMIGD2Q96BF3 282 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 TAMM41Q96BW9 452 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 OMA1Q96E52 524 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 FBXL20Q96IG2 436 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 EXD2Q9NVH0 621 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 CNOT6Q9ULM6 557 aaKnown RBP13.34□□□□□ -0.27
HPS3-201ENST00000296051 DERAQ9Y315 318 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 SCAMP1O15126 338 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 GCAP28676 217 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 GGT5P36269 586 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 SP2Q02086 613 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 GRB14Q14449 540 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 AP5B1Q2VPB7 878 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 MPPE1Q53F39 396 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 ARMCX4Q5H9R4 360 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 ADHFE1Q8IWW8 467 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 COL26A1Q96A83 441 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 COQ7Q99807 217 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 FEM1AQ9BSK4 669 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 ACAT2Q9BWD1 397 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 CHID1Q9BWS9 393 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 SEZ6LQ9BYH1 1024 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 NLNQ9BYT8 704 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 TPK1Q9H3S4 243 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 SYN3O14994 580 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 TP73O15350 636 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 FGF19O95750 216 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 PRKCHP24723 683 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 CHI3L1P36222 383 aaPredicted RBP13.34□□□□□ -0.27
HPS3-201ENST00000296051 NRIP1P48552 1158 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 MERTKQ12866 999 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 CNKSR3Q6P9H4 555 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 FBXO46Q6PJ61 603 aaPredicted RBP13.34□□□□□ -0.27
HPS3-201ENST00000296051 MCFD2Q8NI22 146 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 RPL10LQ96L21 214 aaKnown RBP13.34□□□□□ -0.27
HPS3-201ENST00000296051 TBATAQ96M53 351 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 KCNK13Q9HB14 408 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 AMBNQ9NP70 447 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 BTBD3Q9Y2F9 522 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 APC2O95996 2303 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 ATRNL1Q5VV63 1379 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 MATN2O00339 956 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 SNPHO15079 494 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 DLX3O60479 287 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 NUDT14O95848 222 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms