RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 STMN2Q93045 179 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 GSTO2Q9H4Y5 243 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 NSUN3Q9H649 340 aaKnown RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 SLC28A3Q9HAS3 691 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 SLCO3A1Q9UIG8 710 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 APPL1Q9UKG1 709 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 PLA2G4CQ9UP65 541 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 MTF2Q9Y483 593 aaPredicted RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 CCDC189A1A4V9 331 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 TMEM233B4DJY2 109 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 H3BMM5 538 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 NFATC1O95644 943 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 RPS3P23396 243 aaKnown RBP eCLIP9.07□□□□□ -0.96
PDPN-201ENST00000294489 GKP32189 559 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 IL2P60568 153 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 COL19A1Q14993 1142 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 OR4D1Q15615 310 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 PFKFB4Q16877 469 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 TCEAL5Q5H9L2 206 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 DPY19L3Q6ZPD9 716 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 CPSF7Q8N684 471 aaKnown RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 LRIG1Q96JA1 1093 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 MAELQ96JY0 434 aaKnown RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 ATOH8Q96SQ7 321 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 OSBPL1AQ9BXW6 950 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 HPS4Q9NQG7 708 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 CDH7Q9ULB5 785 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 PCDHB1Q9Y5F3 818 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 RGSL1A5PLK6 1076 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 MEI4A8MW99 385 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 SUPT3HB4E1H0 165 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 UBXN8O00124 270 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 PRMT5O14744 637 aaPredicted RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 OR1I1O60431 355 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 SUPT3HO75486 399 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 SKAP2O75563 359 aaPredicted RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 ARSAP15289 507 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 ZNF7P17097 686 aaPredicted RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 GM2AP17900 193 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 ITGALP20701 1170 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 CPOXP36551 454 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 DGKGP49619 791 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 SLC25A3Q00325 362 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 KPNB1Q14974 876 aaKnown RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 ACCSLQ4AC99 568 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 TPRG1Q6ZUI0 275 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 NET1Q7Z628 596 aaPredicted RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 ULK2Q8IYT8 1036 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 PPP2R3CQ969Q6 453 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 LENG8Q96PV6 779 aaPredicted RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 LMCD1Q9NZU5 365 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 DKK3Q9UBP4 350 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 TRAF6Q9Y4K3 522 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 WASF2Q9Y6W5 498 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 A0A0U1RQS6 177 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 OTOL1A6NHN0 477 aaPredicted RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 HEPACAM2A8MVW5 462 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 TRIM24O15164 1050 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 LINC01565O15544 149 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 NIPSNAP2O75323 286 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 PRAMEF1O95521 474 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 JUNP05412 331 aaKnown RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 PIK3R1P27986 724 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 NAA20P61599 178 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 CUL3Q13618 768 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 TRMT5Q32P41 509 aaKnown RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 UNC50Q53HI1 259 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 CTSL3PQ5NE16 218 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 CRTC1Q6UUV9 634 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 VITQ6UXI7 678 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 FAM151BQ6UXP7 276 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 GDPD4Q6W3E5 623 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 RPS27LQ71UM5 84 aaKnown RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 FBXO39Q8N4B4 442 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 RP9Q8TA86 221 aaKnown RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 CATSPER2Q96P56 530 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 RTKNQ9BST9 563 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 CLEC1BQ9P126 229 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 G3BP2Q9UN86 482 aaKnown RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 NPIPB15A6NHN6 443 aaPredicted RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 BTN3A1O00481 513 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 SDHDO14521 159 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 BNIP3LO60238 219 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 TULP3O75386 442 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 MTHFD2P13995 350 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 BTKQ06187 659 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 CYLC2Q14093 348 aaPredicted RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 TSNQ15631 228 aaKnown RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 KHDC1Q4VXA5 237 aaKnown RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 LYPLAL1Q5VWZ2 237 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 ICE2Q659A1 982 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 TRIM68Q6AZZ1 485 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 BRAT1Q6PJG6 821 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 SNX20Q7Z614 316 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 CLYBLQ8N0X4 340 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 ENDOVQ8N8Q3 282 aaKnown RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 SIDT2Q8NBJ9 832 aaKnown RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 CHST14Q8NCH0 376 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 ACTRT2Q8TDY3 377 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms