RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 GSDMCQ9BYG8 508 aa26.6■■□□□ 1.85
SSU72-201ENST00000291386 ARFGAP3Q9NP61 516 aa26.6■■□□□ 1.85
SSU72-201ENST00000291386 CHRAC1Q9NRG0 131 aa26.6■■□□□ 1.85
SSU72-201ENST00000291386 CCL22O00626 93 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 C2orf54Q08AI8 447 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 ILF3Q12906 894 aaKnown RBP eCLIP26.59■■□□□ 1.85
SSU72-201ENST00000291386 DEFB133Q30KQ1 61 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 C6orf132Q5T0Z8 1188 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 ZNF648Q5T619 568 aaPredicted RBP26.59■■□□□ 1.85
SSU72-201ENST00000291386 IZUMO3Q5VZ72 239 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 MARK2Q7KZI7 788 aaKnown RBP26.59■■□□□ 1.85
SSU72-201ENST00000291386 NRROSQ86YC3 692 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 GDAP1Q8TB36 358 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 ZNF778Q96MU6 729 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 TRIM51Q9BSJ1 452 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 ZCCHC2Q9C0B9 1178 aaKnown RBP26.59■■□□□ 1.85
SSU72-201ENST00000291386 TREX1Q9NSU2 369 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 SYBUQ9NX95 663 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 SLC2A6Q9UGQ3 507 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 GPSM3Q9Y4H4 160 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 PCYT1BQ9Y5K3 369 aaPredicted RBP26.59■■□□□ 1.85
SSU72-201ENST00000291386 MRFAP1Q9Y605 127 aa26.59■■□□□ 1.85
SSU72-201ENST00000291386 ZFC3H1O60293 1989 aaKnown RBP26.58■■□□□ 1.85
SSU72-201ENST00000291386 GIPC1O14908 333 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 GRID2O43424 1007 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 AVILO75366 819 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 MTX2O75431 263 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 CDK14O94921 469 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 CTBSQ01459 385 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 CACNG1Q06432 222 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 DGLUCYQ7Z3D6 616 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 TAF8Q7Z7C8 310 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 NXPE1Q8N323 547 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 CCL4L1Q8NHW4 92 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 SUDS3Q9H7L9 328 aaPredicted RBP26.58■■□□□ 1.85
SSU72-201ENST00000291386 NCKIPSDQ9NZQ3 722 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 ZNHIT2Q9UHR6 403 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 CRLS1Q9UJA2 301 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 SOX13Q9UN79 622 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 DOLKQ9UPQ8 538 aa26.58■■□□□ 1.85
SSU72-201ENST00000291386 MAGEB16A2A368 324 aa26.57■■□□□ 1.84
SSU72-201ENST00000291386 CCDC78A2IDD5 438 aa26.57■■□□□ 1.84
SSU72-201ENST00000291386 SDR42E2A6NKP2 422 aa26.57■■□□□ 1.84
SSU72-201ENST00000291386 CRADDP78560 199 aa26.57■■□□□ 1.84
SSU72-201ENST00000291386 MORF4L2Q15014 288 aa26.57■■□□□ 1.84
SSU72-201ENST00000291386 PPM1JQ5JR12 505 aa26.57■■□□□ 1.84
SSU72-201ENST00000291386 HEXDCQ8WVB3 486 aa26.57■■□□□ 1.84
SSU72-201ENST00000291386 HDAC10Q969S8 669 aa26.57■■□□□ 1.84
SSU72-201ENST00000291386 APOLD1Q96LR9 279 aa26.57■■□□□ 1.84
SSU72-201ENST00000291386 GPR34Q9UPC5 381 aa26.57■■□□□ 1.84
SSU72-201ENST00000291386 ST14Q9Y5Y6 855 aa26.57■■□□□ 1.84
SSU72-201ENST00000291386 CCDC162PA2VCL2 907 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 GOLGA8MH3BSY2 632 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 NDC80O14777 642 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 CKMT1AP12532 417 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 CKMT2P17540 419 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 FOXN2P32314 431 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 GTF2H3Q13889 308 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 ZRANB3Q5FWF4 1079 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 HIBCHQ6NVY1 386 aaPredicted RBP26.56■■□□□ 1.84
SSU72-201ENST00000291386 OGFOD3Q6PK18 319 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 AFTPHQ6ULP2 937 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 LRRTM4Q86VH4 590 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 SNF8Q96H20 258 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 TTC25Q96NG3 672 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 TOR4AQ9NXH8 423 aa26.56■■□□□ 1.84
SSU72-201ENST00000291386 ARHGEF17Q96PE2 2063 aaPredicted RBP26.55■■□□□ 1.84
SSU72-201ENST00000291386 IGLV3-16A0A075B6K0 115 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 LY6G6EA0A0G2JKS1 128 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 EFCAB8A8MWE9 144 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 KMOO15229 486 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 RAD51CO43502 376 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 SEC31AO94979 1220 aaKnown RBP26.55■■□□□ 1.84
SSU72-201ENST00000291386 ACRV1P26436 265 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 CLCNKAP51800 687 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 ZNF547Q8IVP9 402 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 RASGEF1AQ8N9B8 481 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 GLMNQ92990 594 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 ZNF514Q96K75 400 aaPredicted RBP26.55■■□□□ 1.84
SSU72-201ENST00000291386 SIGLEC10Q96LC7 697 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 COPS8Q99627 209 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 ERP44Q9BS26 406 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 FAM96AQ9H5X1 160 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 ZDHHC3Q9NYG2 299 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 PLEKHM1Q9Y4G2 1056 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 DNMT3AQ9Y6K1 912 aaPredicted RBP26.55■■□□□ 1.84
SSU72-201ENST00000291386 U3KQA8 63 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 DCHS1Q96JQ0 3298 aa26.55■■□□□ 1.84
SSU72-201ENST00000291386 FAM237BA0A1B0GVD1 139 aa26.54■■□□□ 1.84
SSU72-201ENST00000291386 SPAARA0A1B0GVQ0 90 aa26.54■■□□□ 1.84
SSU72-201ENST00000291386 DKK1O94907 266 aa26.54■■□□□ 1.84
SSU72-201ENST00000291386 GOT2P00505 430 aaKnown RBP26.54■■□□□ 1.84
SSU72-201ENST00000291386 MSH3P20585 1137 aa26.54■■□□□ 1.84
SSU72-201ENST00000291386 ACP1P24666 158 aa26.54■■□□□ 1.84
SSU72-201ENST00000291386 AK4P27144 223 aaPredicted RBP26.54■■□□□ 1.84
SSU72-201ENST00000291386 NMBRP28336 390 aa26.54■■□□□ 1.84
SSU72-201ENST00000291386 CDKN1CP49918 316 aaPredicted RBP26.54■■□□□ 1.84
SSU72-201ENST00000291386 PRAMEP78395 509 aa26.54■■□□□ 1.84
SSU72-201ENST00000291386 SIM1P81133 766 aaPredicted RBP26.54■■□□□ 1.84
SSU72-201ENST00000291386 CHST15Q7LFX5 561 aaPredicted RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms