RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 HADHBP55084 474 aaKnown RBP15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 OLIG2Q13516 323 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 NODALQ96S42 347 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 PNPLA8Q9NP80 782 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 CACNG4Q9UBN1 327 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 CD84Q9UIB8 345 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 POLR1DQ9Y2S0 133 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 STON1Q9Y6Q2 735 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 KLRG2A4D1S0 409 aaPredicted RBP15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 NEMP2A6NFY4 417 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 LYPLA2O95372 231 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 GPX6P59796 221 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 SNRPD1P62314 119 aaKnown RBP15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 POLR2LP62875 67 aaKnown RBP15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 GNA12Q03113 381 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 TYSND1Q2T9J0 566 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 CCDC157Q569K6 752 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 SFT2D3Q587I9 215 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 PLEKHG4Q58EX7 1191 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 CCNYL2Q5T2Q4 361 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 ZNF544Q6NX49 715 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 A0A1W2PQ67 120 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 C2CD4BA6NLJ0 364 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 AKR1A1P14550 325 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 CKMT2P17540 419 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 LMO2P25791 158 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 RPL4P36578 427 aaKnown RBP15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 SLC1A2P43004 574 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 ACTR3P61158 418 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 ELAVL2Q12926 359 aaKnown RBP15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 HMCESQ96FZ2 354 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 CDK15Q96Q40 435 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 EQTNQ9NQ60 294 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 CCDC59Q9P031 241 aaKnown RBP15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 CXCL11O14625 94 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 TSPAN4O14817 238 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 STX11O75558 287 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 H6PDO95479 791 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 IFI30P13284 250 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 GTF2H2Q13888 395 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 GTF2H2CQ6P1K8 395 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 GPR20Q99678 358 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 IPPKQ9H8X2 491 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 GMIPQ9P107 970 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 PDE10AQ9Y233 779 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 RWDD3Q9Y3V2 267 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 TESMINQ9Y4I5 508 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 EI24O14681 340 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 KPNA6O60684 536 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 TPST2O60704 377 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 ACAP2Q15057 778 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 CPTPQ5TA50 214 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 TOP6BLQ8N6T0 577 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 AP3S1Q92572 193 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 MAPRE3Q9UPY8 281 aa15.23■□□□□ 0.03
SHROOM4-201ENST00000289292 TNFRSF11BO00300 401 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 PGBD2Q6P3X8 592 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 SMYD1Q8NB12 490 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 OR8H1Q8NGG4 311 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 MRPL17Q9NRX2 175 aaKnown RBP15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 TMLHEQ9NVH6 421 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 MALT1Q9UDY8 824 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 PEAK1Q9H792 1746 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 SLC15A5A6NIM6 579 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 NDUFS2O75306 463 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 COL6A2P12110 1019 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 PSMA3P25788 255 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 PKP2Q99959 881 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 C2orf49Q9BVC5 232 aaPredicted RBP15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 TMEM59LQ9UK28 342 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 ZNF232Q9UNY5 417 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 AIREO43918 545 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 ATF4P18848 351 aaPredicted RBP15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 ARL2P36404 184 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 GPR1P46091 355 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 DCLRE1AQ6PJP8 1040 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 DIRAS2Q96HU8 199 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 POLE3Q9NRF9 147 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 FFAR2O15552 330 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 GMFGO60234 142 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 THOC7Q6I9Y2 204 aaKnown RBP15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 CYP2S1Q96SQ9 504 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 INTS7Q9NVH2 962 aaKnown RBP15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 DMAC2Q9NW81 257 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 ARL5AQ9Y689 179 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 H0YGN5 161 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 KPNA5O15131 536 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 PGLSO95336 258 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 GNPDA1P46926 289 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 TUFMP49411 452 aaKnown RBP15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 MTA1Q13330 715 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 FRMD7Q6ZUT3 714 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 RPS27LQ71UM5 84 aaKnown RBP15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 TMPRSS11BQ86T26 416 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 SLC51AQ86UW1 340 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 TOP1MTQ969P6 601 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 TRMOQ9BU70 441 aa15.22■□□□□ 0.03
SHROOM4-201ENST00000289292 NFS1Q9Y697 457 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms