RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 OR2AG1Q9H205 316 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 ERVMER34-1Q9H9K5 563 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 TM7SF3Q9NS93 570 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 TREX1Q9NSU2 369 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 APOBEC3BQ9UH17 382 aaKnown RBP18.16■□□□□ 0.5
SDF4-201ENST00000263741 SDR42E2A6NKP2 422 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 GOLGA8KD6RF30 607 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 GOLGA8TH3BQL2 631 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 AP3B1O00203 1094 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 TOR1BO14657 336 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 EPHA8P29322 1005 aaPredicted RBP18.16■□□□□ 0.5
SDF4-201ENST00000263741 GNPDA1P46926 289 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 ARRB1P49407 418 aaPredicted RBP18.16■□□□□ 0.5
SDF4-201ENST00000263741 HNRNPH2P55795 449 aaKnown RBP18.16■□□□□ 0.5
SDF4-201ENST00000263741 CALCOCO2Q13137 446 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 SKIDA1Q1XH10 827 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 GPRC6AQ5T6X5 926 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 IGDCC3Q8IVU1 814 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 PIANPQ8IYJ0 282 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 ZNF669Q96BR6 464 aaPredicted RBP18.16■□□□□ 0.5
SDF4-201ENST00000263741 LRRC61Q9BV99 259 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 KIFC1Q9BW19 673 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 CARS2Q9HA77 564 aaKnown RBP18.16■□□□□ 0.5
SDF4-201ENST00000263741 SAMD15Q9P1V8 674 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 WHRNQ9P202 907 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 ATXN10Q9UBB4 475 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 APPL1Q9UKG1 709 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 SUFUQ9UMX1 484 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 SLC30A1Q9Y6M5 507 aa18.16■□□□□ 0.5
SDF4-201ENST00000263741 CNOT1A5YKK6 2376 aaKnown RBP18.15■□□□□ 0.5
SDF4-201ENST00000263741 RASGRP1O95267 797 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 GOT2P00505 430 aaKnown RBP18.15■□□□□ 0.5
SDF4-201ENST00000263741 CSF2P04141 144 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 HK3P52790 923 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 PLTPP55058 493 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 ITGA9Q13797 1035 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 FASTKD3Q14CZ7 662 aaKnown RBP18.15■□□□□ 0.5
SDF4-201ENST00000263741 HIF1AQ16665 826 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 ZSCAN26Q16670 478 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 PDPK2PQ6A1A2 396 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 ZDHHC24Q6UX98 284 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 OR6P1Q8NGX9 317 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 FCRL3Q96P31 734 aaPredicted RBP18.15■□□□□ 0.5
SDF4-201ENST00000263741 VPS35Q96QK1 796 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 CRLS1Q9UJA2 301 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 CHMP2BQ9UQN3 213 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 SLC17A4Q9Y2C5 497 aa18.15■□□□□ 0.5
SDF4-201ENST00000263741 H7C0S8 307 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 IVLP07476 585 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 F7P08709 466 aaPredicted RBP18.14■□□□□ 0.5
SDF4-201ENST00000263741 HOXC4P09017 264 aaPredicted RBP18.14■□□□□ 0.5
SDF4-201ENST00000263741 ZNF8P17098 575 aaPredicted RBP18.14■□□□□ 0.5
SDF4-201ENST00000263741 ITGALP20701 1170 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 KELP23276 732 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 ARNTP27540 789 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 PRAMEP78395 509 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 ACVR1Q04771 509 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 PRRT3Q5FWE3 981 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 CRTC3Q6UUV7 619 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 ADGRG6Q86SQ4 1221 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 LDB1Q86U70 411 aaPredicted RBP18.14■□□□□ 0.5
SDF4-201ENST00000263741 ANKMY2Q8IV38 441 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 ZNF548Q8NEK5 533 aaPredicted RBP18.14■□□□□ 0.5
SDF4-201ENST00000263741 CCL4L1Q8NHW4 92 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 FBXO25Q8TCJ0 367 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 DNAAF2Q9NVR5 837 aaKnown RBP18.14■□□□□ 0.5
SDF4-201ENST00000263741 BTBD3Q9Y2F9 522 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 PLEKHM1Q9Y4G2 1056 aa18.14■□□□□ 0.5
SDF4-201ENST00000263741 DCHS1Q96JQ0 3298 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 FFAR2O15552 330 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 PIAS2O75928 621 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 PSMA3P25788 255 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 AKT1P31749 480 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 FOXN2P32314 431 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 SEMA3AQ14563 771 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 PLA2G4EQ3MJ16 856 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 DET1Q7L5Y6 550 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 TAS2R42Q7RTR8 314 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 SNX20Q7Z614 316 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 OXR1Q8N573 874 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 LMX1AQ8TE12 382 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 STAMBPL1Q96FJ0 436 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 TSPYL1Q9H0U9 437 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 TMEM168Q9H0V1 697 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 EPB41L5Q9HCM4 733 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 MARCH4Q9P2E8 410 aaPredicted RBP18.14■□□□□ 0.49
SDF4-201ENST00000263741 RPS6KL1Q9Y6S9 549 aa18.14■□□□□ 0.49
SDF4-201ENST00000263741 VAPBO95292 243 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 DGKAP23743 735 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 ELK3P41970 407 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 RXRGP48443 463 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 LAMB3Q13751 1172 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 AFTPHQ6ULP2 937 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 NLRP9Q7RTR0 991 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 UNC5BQ8IZJ1 945 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 PDIK1LQ8N165 341 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 NXPE1Q8N323 547 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 BBOF1Q8ND07 529 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 SAP25Q8TEE9 199 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 BOCQ9BWV1 1114 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms