RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 RAD17O75943 681 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 SCAF4O95104 1147 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 GCNT3O95395 438 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 ITGA8P53708 1063 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 CTAG1AP78358 180 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC13A2Q13183 592 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 C1DQ13901 141 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 TRADDQ15628 312 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 HIF1AQ16665 826 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 SAMD4BQ5PRF9 694 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 SSX7Q7RTT5 188 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 JAZF1Q86VZ6 243 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 CDAN1Q8IWY9 1227 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 SCML4Q8N228 414 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM46DQ8NEK8 389 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 TMEM68Q96MH6 324 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 OCSTAMPQ9BR26 566 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 NPLQ9BXD5 320 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC19A3Q9BZV2 496 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 POLR1EQ9GZS1 481 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 GANQ9H2C0 597 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 SPHK1Q9NYA1 384 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 GTSE1Q9NYZ3 720 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 CDH22Q9UJ99 828 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 TRHDEQ9UKU6 1024 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 ITGA11Q9UKX5 1188 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 TFR2Q9UP52 801 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 U3KQV3 271 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM208AQ9UK61 1670 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 A0A087X0B3 334 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF99A8MXY4 864 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 CYP26A1O43174 497 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 SPATA31D3P0C874 917 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 TFE3P19532 575 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 UBA1P22314 1058 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 NOS2P35228 1153 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 EN1Q05925 392 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 GRIN2CQ14957 1233 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 POU4F3Q15319 338 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 AOC3Q16853 763 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 IMPG1Q17R60 797 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 OTUD3Q5T2D3 398 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 FOXB2Q5VYV0 432 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 KANK2Q63ZY3 851 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 ZCCHC12Q6PEW1 402 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 KLHL24Q6TFL4 600 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 ETV3LQ6ZN32 361 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 SPATA31D4Q6ZUB0 917 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 KCTD1Q719H9 257 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 METTL16Q86W50 562 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 ERO1BQ86YB8 467 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 OR6C4Q8NGE1 309 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 COQ8AQ8NI60 647 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 RP9Q8TA86 221 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC25A36Q96CQ1 311 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 RNFT2Q96EX2 444 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 C11orf24Q96F05 449 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 VRK1Q99986 396 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 CHCHD6Q9BRQ6 235 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF436Q9C0F3 470 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 VRTNQ9H8Y1 702 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 ZDHHC7Q9NXF8 308 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 LTN1O94822 1766 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 TEX46H3BTG2 121 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 ALAS1P13196 640 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 GNG10P50151 68 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 CDH4P55283 916 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 BATFQ16520 125 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 PAN2Q504Q3 1202 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM98BQ52LJ0 330 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 LRRC8DQ7L1W4 858 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 ZBTB33Q86T24 672 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 LINC00523Q86TU6 105 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM124AQ86V42 546 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 METTL13Q8N6R0 699 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 UXS1Q8NBZ7 420 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 DAGLBQ8NCG7 672 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC30A5Q8TAD4 765 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 RNF139Q8WU17 664 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 TADA1Q96BN2 335 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 HSFY1Q96LI6 401 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 FUNDC2Q9BWH2 189 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 STAP1Q9ULZ2 295 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 ATF5Q9Y2D1 282 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 MRC1P22897 1456 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 PFASO15067 1338 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 TRAFD1O14545 582 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC7A4O43246 635 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 VAPBO95292 243 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 EPB42P16452 691 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 TSPAN7P41732 249 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 DUSP7Q16829 419 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF404Q494X3 552 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 DYMQ7RTS9 669 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 THAP5Q7Z6K1 395 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 MYCT1Q8N699 235 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 HCAR2Q8TDS4 363 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 AZIN2Q96A70 460 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 TMEM109Q9BVC6 243 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 HOXD1Q9GZZ0 328 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms