RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 GcatO88986 416 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Aff3P51827 1254 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Bcl2a1Q07440 172 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Vac14Q80WQ2 782 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Klhl26Q8BGY4 606 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 PdhxQ8BKZ9 501 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Lrrc19Q8BZT5 364 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Pitrm1Q8K411 1036 aaKnown RBP13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 GneQ91WG8 722 aaKnown RBP13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tmed11Q9D2R4 215 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Dhx34Q9DBV3 1145 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Syde1Q9DBZ9 737 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Rfx5Q9JL61 658 aa13.76□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ankrd16A2AS55 361 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Skint11A7XV14 364 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ssxb8B1AY40 170 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Azin1O35484 448 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 NfycP70353 335 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 PrkcqQ02111 707 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Clec12aQ504P2 267 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Rhbdf2Q80WQ6 827 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Slitrk2Q810C0 846 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Susd6Q8BGE4 302 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Kctd13Q8BGV7 329 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Phtf2Q8CB19 747 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Panx3Q8CEG0 392 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Acap1Q8K2H4 740 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Cdc16Q8R349 620 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Igsf8Q8R366 611 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tcf25Q8R3L2 676 aaKnown RBP13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tspan1Q99J59 240 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Rexo2Q9D8S4 237 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Mrps15Q9DC71 258 aaKnown RBP13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 VapbQ9QY76 243 aaKnown RBP13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Copg1Q9QZE5 874 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Olfr1049A2ARZ0 308 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm7073E9QAS1 335 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Atxn1lP0C7T6 687 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Grin2cQ01098 1239 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Foxd1Q61345 456 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Olfr809Q8VEX8 328 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Asb6Q91ZU1 418 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tchhl1Q9D3P1 638 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 PacrglQ9D3X5 248 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tex22Q9D9U4 189 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Keap1Q9Z2X8 624 aaKnown RBP13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Syndig1A2ANU3 258 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm6685D3YYP3 228 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Vmn2r38G3UYA8 861 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Vmn2r33K7N705 861 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ebf3O08791 596 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Slc5a10Q5SWY8 596 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 MogQ61885 246 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Rbl1Q64701 1063 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Cd300lfQ6SJQ7 337 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Trpm4Q7TN37 1213 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Reep1Q8BGH4 201 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Vps26bQ8C0E2 336 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Slitrk6Q8C110 840 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 NaprtQ8CC86 538 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gsto2Q8K2Q2 248 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Nufip1Q9QXX8 484 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Rfc2Q9WUK4 349 aaKnown RBP13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Sirpb1aA0A0A6YYP6 397 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 G430095P16RikE9Q913 147 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Olfr603L7N1Y4 312 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ltb4rO88855 351 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ccnb1P24860 430 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Q3UTZ3 580 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ipcef1Q5DU31 406 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tlr12Q6QNU9 906 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Olfr1080Q7TR67 313 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 1700001J03RikQ80ZR8 219 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Klhl12Q8BZM0 568 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ints10Q8K2A7 710 aaKnown RBP13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Kctd5Q8VC57 234 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 ScgnQ91WD9 276 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Scd3Q99PL7 359 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tex12Q9CR81 123 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Hddc3Q9D114 179 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Nxnl2Q9D531 156 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ovca2Q9D7E3 225 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Pou5f2Q9DAC9 329 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ing1Q9QXV3 279 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Dnaja2Q9QYJ0 412 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tle6Q9WVB3 581 aa13.75□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Arhgap36B1AUC7 590 aa13.74□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm3636E9Q5P1 227 aa13.74□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm11239E9Q5Z9 360 aa13.74□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm11237F2Z3W5 360 aa13.74□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm11238F2Z478 360 aa13.74□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tead2P48301 445 aa13.74□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Hpcal1P62748 193 aa13.74□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm428Q3UTE2 360 aa13.74□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gpr21Q8BX79 349 aa13.74□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Smco1Q8CEZ1 214 aa13.74□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Kcne2Q9D808 123 aa13.74□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ern2Q9Z2E3 911 aa13.74□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Fndc3c1Q6DFV6 1356 aa13.74□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm3147A0A0J9YU88 481 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 58.5 ms