RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Vmn2r59E9PUT5 865 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Vmn2r86G5E8Y4 848 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Prom1O54990 867 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Cbx4O55187 551 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Spp1P10923 294 aaKnown RBP16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Tnfsf4P43488 198 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Mrpl10Q3TBW2 262 aaKnown RBP16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Ints7Q7TQK1 966 aaKnown RBP16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Hist3h2aQ8BFU2 130 aaKnown RBP16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Bmp3Q8BHE5 468 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Csgalnact1Q8BJQ9 530 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Hist1h2afQ8CGP5 130 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Hist1h2ahQ8CGP6 128 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Hist1h2akQ8CGP7 130 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 H2afjQ8R1M2 129 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Ppa2Q91VM9 330 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 BniplQ99JU7 328 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Adgrb1Q3UHD1 1582 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Gm13078A2AGW8 474 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Pex10B1AUE5 324 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 TyrobpO54885 114 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Smpd2O70572 419 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 AladP10518 330 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Trim40Q3UWA4 246 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Eri2Q5BKS4 688 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 RbfaQ6P3B9 350 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Znf473Q8BI67 892 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Syn3Q8JZP2 579 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Ifi44lQ9BDB7 447 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Ogfod2Q9CQ04 349 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Zbed3Q9D0L1 228 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Agpat3Q9D517 376 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Nacc2Q9DCM7 586 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Gm21488A0A087WR99 222 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Clip3B9EHT4 547 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Cyp4a14O35728 507 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Fpr-rs3O88537 343 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Ag2Q3UPL5 249 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Zfp759Q7M6X3 721 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Dlgap2Q8BJ42 1059 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Hspbap1Q8BK58 483 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Fgd2Q8BY35 655 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Lrrc19Q8BZT5 364 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Smco1Q8CEZ1 214 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Nudt4Q8R2U6 179 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 RergQ8R367 199 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Myl9Q9CQ19 172 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Ampd2Q9DBT5 798 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Vmn2r25W4VSP2 855 aa16.5■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Gm4846B2RWH8 538 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Ncam1P13595 1115 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Gdf6P43028 454 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 UcmaQ14BU0 138 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Rnf44Q3UHJ8 407 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Olfr325Q5NCD2 326 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Plin5Q8BVZ1 463 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Slc25a36Q922G0 311 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Clp1Q99LI9 425 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Gtf2h2Q9JIB4 396 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Klhl32A2AJX0 620 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Cldn5O54942 218 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Slc6a20bO88575 635 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Slc10a3P21129 473 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Nlrp10Q8CCN1 673 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Slc6a20aQ8VDB9 592 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Olfr170Q8VGL6 313 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Mob2Q8VI63 235 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 MispQ9D279 648 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Hsd3b7Q9EQC1 369 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Padi3Q9Z184 664 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Olfr1200A2ATJ4 336 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Nsmce4aG3XA30 381 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Chrna4O70174 629 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Atxn2O70305 1285 aaKnown RBP16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Gna13P27601 377 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Nudt2P56380 147 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Slc6a3Q61327 619 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Insig1Q8BGI3 259 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Tbl3Q8C4J7 801 aaKnown RBP16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Aqp12Q8CHJ2 290 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Lin7aQ8JZS0 233 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Adgre4Q91ZE5 689 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Pmf1Q9CPV5 202 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Slc25a11Q9CR62 314 aaKnown RBP16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Mrps15Q9DC71 258 aaKnown RBP16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Nmnat1Q9EPA7 285 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Pramef6A2A8M8 474 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Zmynd12A2BGJ5 363 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Vmn2r125D3Z3M1 369 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Mroh5E9PUJ8 762 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Rab12P35283 243 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Ankdd1bQ14DN9 521 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Prpf38bQ80SY5 542 aaKnown RBP16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Gpr139Q80UC8 345 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Rsl1d1Q8BVY0 452 aaKnown RBP16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Commd2Q8BXC6 199 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Fam46bQ8C152 427 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Hkdc1Q91W97 915 aa16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 VarsQ9Z1Q9 1263 aaKnown RBP16.49■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Chd4Q6PDQ2 1915 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms