RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 RttnQ8R4Y8 2226 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Esp31A8R0W3 114 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ssxb8B1AY40 170 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cdk2ap1O35207 114 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Traf6P70196 530 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Mpp1P70290 466 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tmc5Q32NZ6 967 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cyp2d40Q6P8N9 338 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Snx31Q6P8Y7 439 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cand1Q6ZQ38 1230 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Wfikkn2Q7TQN3 571 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr538Q7TRT5 310 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tex13c3Q810P0 219 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 UnkQ8BL48 810 aaKnown RBP10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rap2cQ8BU31 183 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 MaelQ8BVN9 434 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Phtf2Q8CB19 747 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tcf7l2Q924A0 459 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 LiasQ99M04 373 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Bbs2Q9CWF6 721 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Isl2Q9CXV0 359 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Agpat3Q9D517 376 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Hmgn3Q9DCB1 99 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Galk1Q9R0N0 392 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc23a1Q9Z2J0 605 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 4933424G06RikA0A140LIP3 267 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Sh3pxd2bA2AAY5 908 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Klhl32A2AJX0 620 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Zbed5B2RPU8 756 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr652B9EHE6 318 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 H2-T24F8VQG4 363 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fam181aJ3QNB7 292 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 P01650 108 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 P01653 108 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Hoxa2P31245 372 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Agtr2P35374 363 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Aff3P51827 1254 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Meaf6Q2VPQ9 191 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 HiraQ61666 1015 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rbl1Q64701 1063 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rps27lQ6ZWY3 84 aaKnown RBP10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ints7Q7TQK1 966 aaKnown RBP10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Suz12Q80U70 741 aaKnown RBP10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Samd4bQ80XS6 687 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 HadhaQ8BMS1 763 aaKnown RBP10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gpr21Q8BX79 349 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rab15Q8K386 212 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fbxo33Q8VE08 562 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 BniplQ99JU7 328 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ttc9bQ9D6E4 239 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Nt5cQ9JM14 200 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 CpqQ9WVJ3 470 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Col2a1P28481 1487 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr671A0A1B0GSN5 317 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tbc1d25A1A5B6 742 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm5751A2AHC8 147 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Vmn2r84D3YWE3 849 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Speer4cG3UXD1 256 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr694K7N641 315 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm10354K7N6A0 256 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr603L7N1Y4 312 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Il1aP01582 270 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gja1P23242 382 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gpr165Q3V3A3 455 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tmem45aQ60774 273 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 GkQ64516 559 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Deup1Q7M6Y5 601 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Arl5aQ80ZU0 179 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tmem62Q8BXJ9 643 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Wdr37Q8CBE3 496 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 PvrQ8K094 408 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 RhoqQ8R527 205 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ttc39cQ8VE09 580 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Lmcd1Q8VEE1 365 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 FopnlQ9CZS3 174 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pou5f2Q9DAC9 329 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 RhojQ9ER71 214 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cldn19Q9ET38 224 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 ClcnkbQ9WUB6 687 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Vmn2r7E9PYL5 915 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm340F6RGI3 1242 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Vmn2r3H3BJ88 915 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Vmn2r6H3BK29 913 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cyp27b1O35084 507 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 HcrtO55241 130 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 PargO88622 969 aaKnown RBP10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Mcpt1P11034 246 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 RapsnP12672 412 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cfhr2Q4LDF6 332 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Mef2aQ60929 498 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 PtprrQ62132 656 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Syt14Q7TN84 555 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Mettl21cQ8BLU2 248 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Usp43Q8BUM9 1132 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Zbtb8bQ8CII0 484 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Sgpl1Q8R0X7 568 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc22a19Q8VCA0 551 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr1019Q8VGS3 310 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Itfg1Q99KW9 610 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ddx59Q9DBN9 619 aa10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms