RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 PRMT5O14744 637 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-232ENST00000641947 LYPLA1O75608 230 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-232ENST00000641947 ASGR2P07307 311 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 CD1DP15813 335 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 XPAP23025 273 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-232ENST00000641947 TIE1P35590 1138 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 KCNC1P48547 511 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 B4GALNT1Q00973 533 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 ILF2Q12905 390 aaKnown RBP17.44■□□□□ 0.38
PHGDH-232ENST00000641947 ITGA9Q13797 1035 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 GPR33Q49SQ1 333 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 SPATA21Q7Z572 469 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 TECPR1Q7Z6L1 1165 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 CACUL1Q86Y37 369 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 CHPFQ8IZ52 775 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 SLC44A3Q8N4M1 653 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 CLDN19Q8N6F1 224 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 RAB3IL1Q8TBN0 382 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 CD200R1Q8TD46 325 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.44■□□□□ 0.382e-7■■■■■ 60.5
PHGDH-232ENST00000641947 SGF29Q96ES7 293 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 TSNARE1Q96NA8 513 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 WRAP53Q9BUR4 548 aaKnown RBP17.44■□□□□ 0.38
PHGDH-232ENST00000641947 OXSMQ9NWU1 459 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 TAS2R13Q9NYV9 303 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 PKD2L2Q9NZM6 624 aa17.44■□□□□ 0.38
PHGDH-232ENST00000641947 MBD1Q9UIS9 605 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-232ENST00000641947 NEMP2A6NFY4 417 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 AREL1O15033 823 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 ZBTB14O43829 449 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 DLX3O60479 287 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 EGFP01133 1207 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 ESR1P03372 595 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 APOA4P06727 396 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 ADRB3P13945 408 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 RPS3P23396 243 aaKnown RBP eCLIP17.43■□□□□ 0.383e-8■■■■■ 28.4
PHGDH-232ENST00000641947 TNFRSF4P43489 277 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 CLCN7P51798 805 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 DMTNQ08495 405 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 PDAP1Q13442 181 aaKnown RBP17.43■□□□□ 0.38
PHGDH-232ENST00000641947 PON2Q15165 354 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 FAM83EQ2M2I3 478 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 PREPLQ4J6C6 727 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-232ENST00000641947 CACNA2D3Q8IZS8 1091 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 MRPL57Q9BQC6 102 aaKnown RBP17.43■□□□□ 0.38
PHGDH-232ENST00000641947 CCDC68Q9H2F9 335 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 MRPL46Q9H2W6 279 aaKnown RBP17.43■□□□□ 0.38
PHGDH-232ENST00000641947 SUN2Q9UH99 717 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 COQ6Q9Y2Z9 468 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 COL6A3P12111 3177 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 SHISA7A6NL88 538 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 NARSO43776 548 aaKnown RBP17.43■□□□□ 0.38
PHGDH-232ENST00000641947 TSPAN12O95859 305 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 ELFN1P0C7U0 828 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 MYL2P10916 166 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 RALBP11234 206 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 TFEBP19484 476 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 DRD3P35462 400 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 SLC26A3P40879 764 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 P2RY2P41231 377 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 LIG3P49916 1009 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 DCDC1P59894 354 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 CAMK2GQ13555 558 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-232ENST00000641947 HENMT1Q5T8I9 393 aaKnown RBP17.43■□□□□ 0.38
PHGDH-232ENST00000641947 AGAP9Q5VTM2 703 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 KIAA1211LQ6NV74 962 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 ERAP2Q6P179 960 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 ISCA2Q86U28 154 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 TRIM42Q8IWZ5 723 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 RBFAQ8N0V3 343 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 PELI3Q8N2H9 469 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 TXNDC5Q8NBS9 432 aaKnown RBP17.43■□□□□ 0.38
PHGDH-232ENST00000641947 RDH11Q8TC12 318 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 KCNJ9Q92806 393 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 SORT1Q99523 831 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 ALG9Q9H6U8 611 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 PIAS3Q9Y6X2 628 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 TRPM6Q9BX84 2022 aa17.43■□□□□ 0.38
PHGDH-232ENST00000641947 NUMA1Q14980 2115 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 FADS2P1A8MWK0 482 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 PFDN6O15212 129 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 SERPINE1P05121 402 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 ZNF7P17097 686 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-232ENST00000641947 CD9P21926 228 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 PFKPQ01813 784 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 CNTN1Q12860 1018 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 STX3Q13277 289 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 ACAP2Q15057 778 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 OR4D1Q15615 310 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 ATG16L1Q676U5 607 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 FBXL19Q6PCT2 694 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 C6orf89Q6UWU4 347 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 AADATQ8N5Z0 425 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 CCDC197Q8NCU1 140 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 RFWD2Q8NHY2 731 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 PPM1EQ8WY54 764 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 COQ10AQ96MF6 247 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 C7orf26Q96N11 449 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 RIOK2Q9BVS4 552 aaKnown RBP17.42■□□□□ 0.38
PHGDH-232ENST00000641947 SPATA16Q9BXB7 569 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms