RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 XKR5Q6UX68 686 aa14.5□□□□□ -0.09
SCARB2-221ENST00000640341 SYVN1Q86TM6 617 aa14.5□□□□□ -0.09
SCARB2-221ENST00000640341 ANKFN1Q8N957 763 aa14.5□□□□□ -0.09
SCARB2-221ENST00000640341 FAM193BQ96PV7 902 aaPredicted RBP14.5□□□□□ -0.09
SCARB2-221ENST00000640341 ATOH8Q96SQ7 321 aa14.5□□□□□ -0.09
SCARB2-221ENST00000640341 PAIP1Q9H074 479 aaKnown RBP14.5□□□□□ -0.09
SCARB2-221ENST00000640341 ING2Q9H160 280 aa14.5□□□□□ -0.09
SCARB2-221ENST00000640341 LTB4R2Q9NPC1 389 aa14.5□□□□□ -0.09
SCARB2-221ENST00000640341 ATP6V0D1P61421 351 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 RPS24P62847 133 aaKnown RBP14.49□□□□□ -0.09
SCARB2-221ENST00000640341 ANKDD1AQ495B1 522 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 MORN1Q5T089 497 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 LINGO4Q6UY18 593 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 ADGRG5Q8IZF4 528 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 CENPNQ96H22 339 aaPredicted RBP14.49□□□□□ -0.09
SCARB2-221ENST00000640341 PKMYT1Q99640 499 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 AARSD1Q9BTE6 412 aaKnown RBP14.49□□□□□ -0.09
SCARB2-221ENST00000640341 ZBED2Q9BTP6 218 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 C9orf16Q9BUW7 83 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 MRGBPQ9NV56 204 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 PRRC2BQ5JSZ5 2229 aaKnown RBP14.49□□□□□ -0.09
SCARB2-221ENST00000640341 SLC22A3O75751 556 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 C1RP00736 705 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 CNPP09543 421 aaKnown RBP14.49□□□□□ -0.09
SCARB2-221ENST00000640341 IDO1P14902 403 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 ELK4P28324 431 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 PSMD8P48556 350 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 IST1P53990 364 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 PMS2P3Q13401 168 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 FAM171A1Q5VUB5 890 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 KLHL35Q6PF15 583 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 C16orf59Q7L2K0 433 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 CCDC117Q8IWD4 279 aaPredicted RBP14.49□□□□□ -0.09
SCARB2-221ENST00000640341 DCP1BQ8IZD4 617 aaKnown RBP14.49□□□□□ -0.09
SCARB2-221ENST00000640341 EEF1AKMT1Q8WVE0 214 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 BTN2A3PQ96KV6 586 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 SUSD3Q96L08 255 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 TBCDQ9BTW9 1192 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 AGPAT4Q9NRZ5 378 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 TMEM248Q9NWD8 314 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 ANAPC2Q9UJX6 822 aa14.49□□□□□ -0.09
SCARB2-221ENST00000640341 DLGAP1O14490 977 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 IRF1P10914 325 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 HUNKP57058 714 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 OR4D2P58180 307 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 CTBSQ01459 385 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 TWF1Q12792 350 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 TRIM32Q13049 653 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 MYBPC3Q14896 1274 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 PYCR3Q53H96 274 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 AFMIDQ63HM1 303 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 BLOC1S3Q6QNY0 202 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 IL27RAQ6UWB1 636 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 GLB1LQ6UWU2 654 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 STK32CQ86UX6 486 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 ERI1Q8IV48 349 aaKnown RBP14.48□□□□□ -0.09
SCARB2-221ENST00000640341 PIANPQ8IYJ0 282 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 LRRC43Q8N309 656 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 BRSK1Q8TDC3 778 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 FIG4Q92562 907 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 LINGO1Q96FE5 620 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 CHID1Q9BWS9 393 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 SDR39U1Q9NRG7 319 aaPredicted RBP14.48□□□□□ -0.09
SCARB2-221ENST00000640341 ACTR3BQ9P1U1 418 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 FKBPLQ9UIM3 349 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 BBIP1A8MTZ0 92 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 A8MX80 341 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 M0QZQ0 153 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 FFAR3O14843 346 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 GPR42O15529 346 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 LDLRP01130 860 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 POLR2JP52435 117 aaKnown RBP14.48□□□□□ -0.09
SCARB2-221ENST00000640341 SERINC3Q13530 473 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 KANK2Q63ZY3 851 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 PSAPL1Q6NUJ1 521 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 TBPL2Q6SJ96 375 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 LRRC49Q8IUZ0 686 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 KLHDC8BQ8IXV7 354 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 KIAA2013Q8IYS2 634 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 FBXO30Q8TB52 745 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 GPATCH1Q9BRR8 931 aaKnown RBP14.48□□□□□ -0.09
SCARB2-221ENST00000640341 CINPQ9BW66 212 aaPredicted RBP14.48□□□□□ -0.09
SCARB2-221ENST00000640341 RPF2Q9H7B2 306 aaKnown RBP14.48□□□□□ -0.09
SCARB2-221ENST00000640341 SPC25Q9HBM1 224 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 TIMMDC1Q9NPL8 285 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 ARMC1Q9NVT9 282 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 PAPSS2O95340 614 aaPredicted RBP14.48□□□□□ -0.09
SCARB2-221ENST00000640341 CYP11A1P05108 521 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 RPS9P46781 194 aaKnown RBP14.48□□□□□ -0.09
SCARB2-221ENST00000640341 GALNT1Q10472 559 aaPredicted RBP14.48□□□□□ -0.09
SCARB2-221ENST00000640341 LAPTM5Q13571 262 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 NR6A1Q15406 480 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 FGD3Q5JSP0 725 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 NANOGP8Q6NSW7 305 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 KCTD8Q6ZWB6 473 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 TRPV1Q8NER1 839 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 TRPV3Q8NET8 790 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 OR10Q1Q8NGQ4 319 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 OR2T11Q8NH01 316 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 METTL6Q8TCB7 284 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms