RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CCSER2Q9H7U1 834 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 DPP7Q9UHL4 492 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 ZDHHC2Q9UIJ5 367 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 ARIH1Q9Y4X5 557 aaPredicted RBP14.34□□□□□ -0.11
SCARB2-216ENST00000639300 KCTD3Q9Y597 815 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 CPQQ9Y646 472 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 AHCYL1O43865 530 aa14.33□□□□□ -0.11
SCARB2-216ENST00000639300 NIPSNAP2O75323 286 aa14.33□□□□□ -0.11
SCARB2-216ENST00000639300 CKMT2P17540 419 aa14.33□□□□□ -0.11
SCARB2-216ENST00000639300 ACBD5Q5T8D3 534 aaPredicted RBP14.33□□□□□ -0.11
SCARB2-216ENST00000639300 MFSD4BQ5TF39 518 aa14.33□□□□□ -0.11
SCARB2-216ENST00000639300 CERS6Q6ZMG9 384 aa14.33□□□□□ -0.11
SCARB2-216ENST00000639300 ZNF605Q86T29 641 aa14.33□□□□□ -0.11
SCARB2-216ENST00000639300 FIBCD1Q8N539 461 aa14.33□□□□□ -0.11
SCARB2-216ENST00000639300 OSBPL2Q9H1P3 480 aa14.33□□□□□ -0.11
SCARB2-216ENST00000639300 LRTM1Q9HBL6 345 aa14.33□□□□□ -0.11
SCARB2-216ENST00000639300 KLHL28Q9NXS3 571 aa14.33□□□□□ -0.11
SCARB2-216ENST00000639300 COMMD3-BMI1R4GMX3 469 aa14.33□□□□□ -0.11
SCARB2-216ENST00000639300 SPACA6W5XKT8 324 aa14.33□□□□□ -0.11
SCARB2-216ENST00000639300 SYN3O14994 580 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 DLDP09622 509 aaKnown RBP14.33□□□□□ -0.12
SCARB2-216ENST00000639300 CCR10P46092 362 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 RPIAP49247 311 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 CDH4P55283 916 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 C1DQ13901 141 aaKnown RBP14.33□□□□□ -0.12
SCARB2-216ENST00000639300 LRRC73Q5JTD7 316 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 BROXQ5VW32 411 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 RBM23Q86U06 439 aaKnown RBP14.33□□□□□ -0.12
SCARB2-216ENST00000639300 ANKRD46Q86W74 232 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 C2orf73Q8N5S3 287 aaPredicted RBP14.33□□□□□ -0.12
SCARB2-216ENST00000639300 ASF1AQ9Y294 204 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 OR2AG2A6NM03 316 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 BBIP1A8MTZ0 92 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 PIRO00625 290 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 ENPP3O14638 875 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 NBNO60934 754 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 CDK14O94921 469 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 CTNNB1P35222 781 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 PAFAH1B3Q15102 231 aaKnown RBP14.33□□□□□ -0.12
SCARB2-216ENST00000639300 SPRED3Q2MJR0 410 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 INO80DQ53TQ3 878 aaPredicted RBP14.33□□□□□ -0.12
SCARB2-216ENST00000639300 TAPT1Q6NXT6 567 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 CRTC3Q6UUV7 619 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 DSG4Q86SJ6 1040 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 PIM3Q86V86 326 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 SERPINA9Q86WD7 417 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 HEATR4Q86WZ0 1026 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 FUBP3Q96I24 572 aaKnown RBP eCLIP14.33□□□□□ -0.122e-19■■■■■ 47.5
SCARB2-216ENST00000639300 SYT11Q9BT88 431 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 CD84Q9UIB8 345 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 TMCO1Q9UM00 188 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 HS3ST4Q9Y661 456 aa14.33□□□□□ -0.12
SCARB2-216ENST00000639300 PHRF1Q9P1Y6 1649 aaKnown RBP14.33□□□□□ -0.12
SCARB2-216ENST00000639300 NPHS1O60500 1241 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 EDNRBP24530 442 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 KRT20P35900 424 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 MAPKAPK2P49137 400 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 NAA20P61599 178 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 EPS8Q12929 822 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 PTPRCAPQ14761 206 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 TREML1Q86YW5 311 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 TP53INP2Q8IXH6 220 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 PHF21AQ96BD5 680 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 MRPS26Q9BYN8 205 aaKnown RBP14.32□□□□□ -0.12
SCARB2-216ENST00000639300 TSC22D4Q9Y3Q8 395 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 COPG1Q9Y678 874 aaKnown RBP14.32□□□□□ -0.12
SCARB2-216ENST00000639300 SNTNA6NMZ2 147 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 KPNA5O15131 536 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 ADSLP30566 484 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-216ENST00000639300 SIM2Q14190 667 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-216ENST00000639300 OTOP2Q7RTS6 562 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 SPATA19Q7Z5L4 167 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 CDKN2AIPNLQ96HQ2 116 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 ZMYND8Q9ULU4 1186 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-216ENST00000639300 KLHL20Q9Y2M5 609 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 AP3M1Q9Y2T2 418 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 PCDHB1Q9Y5F3 818 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 CNTN5O94779 1100 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 FTH1P02794 183 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 UGT1A6P19224 532 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 EFNA1P20827 205 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-216ENST00000639300 UGT1A1P22309 533 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 UGT1A4P22310 534 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 TTKP33981 857 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 UGT1A3P35503 534 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 UGT1A5P35504 534 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 ACLYP53396 1101 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 NAE1Q13564 534 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 PHKG1Q16816 387 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 OR9I1Q8NGQ6 314 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 A8MT66 165 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 H0Y858 1186 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 KLF11O14901 512 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 IQCF3P0C7M6 154 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 ELFN1P0C7U0 828 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 GGT5P36269 586 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 CENPAP49450 140 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 ZNF540Q8NDQ6 660 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 OR7A2PQ8NGA2 310 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 ALG2Q9H553 416 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms