RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 OMDQ99983 421 aa3.96□□□□□ -1.77
SCN1A-214ENST00000637038 C16orf70Q9BSU1 422 aa3.96□□□□□ -1.77
SCN1A-214ENST00000637038 ADI1Q9BV57 179 aa3.96□□□□□ -1.77
SCN1A-214ENST00000637038 ERVK-6Q9BXR3 956 aa3.96□□□□□ -1.77
SCN1A-214ENST00000637038 MFRPQ9BY79 579 aa3.96□□□□□ -1.77
SCN1A-214ENST00000637038 OXCT2Q9BYC2 517 aaPredicted RBP3.96□□□□□ -1.77
SCN1A-214ENST00000637038 MAGEE1Q9HCI5 957 aa3.96□□□□□ -1.77
SCN1A-214ENST00000637038 PALMDQ9NP74 551 aa3.96□□□□□ -1.77
SCN1A-214ENST00000637038 MID1IP1Q9NPA3 183 aa3.96□□□□□ -1.77
SCN1A-214ENST00000637038 COMMD8Q9NX08 183 aa3.96□□□□□ -1.77
SCN1A-214ENST00000637038 ACTR3BQ9P1U1 418 aa3.96□□□□□ -1.77
SCN1A-214ENST00000637038 POLG2Q9UHN1 485 aa3.96□□□□□ -1.77
SCN1A-214ENST00000637038 MAGEL2Q9UJ55 1249 aa3.96□□□□□ -1.77
SCN1A-214ENST00000637038 RNF112Q9ULX5 631 aa3.96□□□□□ -1.77
SCN1A-214ENST00000637038 hCG_2014768A0A024R1R8 64 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 GNGT2O14610 69 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 ACOT8O14734 319 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 MBTPS2O43462 519 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 HTRA2O43464 458 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 TULP3O75386 442 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 VPS26AO75436 327 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 NDUFS3O75489 264 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CSPG5O95196 566 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 SLC4A1P02730 911 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 HSD17B1P14061 328 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CDH2P19022 906 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 HOXA11P31270 313 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CD68P34810 354 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CAPGP40121 348 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 LEPRP48357 1165 aaKnown RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 NFKB2Q00653 900 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CHRNB3Q05901 458 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 SPIDRQ14159 915 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 RBBP7Q16576 425 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CYP51A1Q16850 503 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 FAM98BQ52LJ0 330 aaKnown RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 TTC23Q5W5X9 447 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 UGT3A1Q6NUS8 523 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 TAPT1Q6NXT6 567 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 OSTM1Q86WC4 334 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 TICAM1Q8IUC6 712 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 FAM9CQ8IZT9 166 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CENPLQ8N0S6 344 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 PAF1Q8N7H5 531 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 PTGR2Q8N8N7 351 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 TMEM102Q8N9M5 508 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 OR56A4Q8NGH8 313 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 DNAJB3Q8WWF6 145 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 MYLPFQ96A32 169 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 L3HYPDHQ96EM0 354 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 NSMCE2Q96MF7 247 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CIB1Q99828 191 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 TUBA1CQ9BQE3 449 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 ACBD6Q9BR61 282 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 ALG9Q9H6U8 611 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 NOL11Q9H8H0 719 aaKnown RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 WDR6Q9NNW5 1121 aaKnown RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 NT5MQ9NPB1 228 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 OLA1Q9NTK5 396 aaKnown RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CCM2LQ9NUG4 571 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 INTS10Q9NVR2 710 aaKnown RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 SMPD3Q9NY59 655 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 TAS2R13Q9NYV9 303 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 LRFN2Q9ULH4 789 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 PCDHGA7Q9Y5G6 932 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CCDC154A6NI56 674 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 J3QKU1 62 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 VILLO15195 856 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 GPR182O15218 404 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 IRAK2O43187 625 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 ADCY6O43306 1168 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 TIPRLO75663 272 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 OR6B1O95007 311 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 MOCS2O96007 188 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 PGK1P00558 417 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 SELPP16109 830 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 MYF6P23409 242 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 KPNA1P52294 538 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 C21orf59P57076 290 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 NKX3-2P78367 333 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 MERTKQ12866 999 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 LCP2Q13094 533 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 XKR4Q5GH76 650 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 FAM182AQ5T1J6 154 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CCNYL2Q5T2Q4 361 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 OTUD1Q5VV17 481 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 LCN8Q6JVE9 175 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CCBE1Q6UXH8 406 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 FRA10AC1Q70Z53 315 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 RTL10Q7L3V2 364 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 ZNF605Q86T29 641 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CARM1Q86X55 608 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 DENND6AQ8IWF6 608 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 PELI3Q8N2H9 469 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 CHCHD4Q8N4Q1 142 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 MINDY1Q8N5J2 469 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 NDRG1Q92597 394 aaKnown RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 FATE1Q969F0 183 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 VPS33AQ96AX1 596 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms