RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 HACD3Q9P035 362 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 CD207Q9UJ71 328 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 ZMYM5Q9UJ78 669 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 TRAF6Q9Y4K3 522 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 NOTCH4Q99466 2003 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 DENND4CQ5VZ89 1909 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 DRGXA6NNA5 263 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 E7ENX8 843 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 NRG2O14511 850 aaPredicted RBP17.37■□□□□ 0.37
FAM3A-222ENST00000621967 MOSPD3O75425 235 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 CRTAMO95727 393 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 MBL2P11226 248 aaPredicted RBP17.37■□□□□ 0.37
FAM3A-222ENST00000621967 ARSAP15289 507 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 FDXRP22570 491 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 MTHFRP42898 656 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 PRAMEP78395 509 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 PPP1R3AQ16821 1122 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 C8orf82Q6P1X6 216 aaPredicted RBP17.37■□□□□ 0.37
FAM3A-222ENST00000621967 HACD2Q6Y1H2 254 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 LARP4Q71RC2 724 aaKnown RBP eCLIP17.37■□□□□ 0.37
FAM3A-222ENST00000621967 ARL14EPQ8N8R7 260 aaPredicted RBP17.37■□□□□ 0.37
FAM3A-222ENST00000621967 PNPLA1Q8N8W4 532 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 SMRP1Q8NCR6 262 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 IGSF8Q969P0 613 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 PHF21BQ96EK2 531 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 ALG9Q9H6U8 611 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 CNOT11Q9UKZ1 510 aaKnown RBP17.37■□□□□ 0.37
FAM3A-222ENST00000621967 PFKLP17858 780 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 KCNC1P48547 511 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 HSPA13P48723 471 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 POLE2P56282 527 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 PDAP1Q13442 181 aaKnown RBP17.37■□□□□ 0.37
FAM3A-222ENST00000621967 TRIP4Q15650 581 aaPredicted RBP17.37■□□□□ 0.37
FAM3A-222ENST00000621967 AGKQ53H12 422 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 UNC50Q53HI1 259 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 FBXL22Q6P050 247 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 LDB1Q86U70 411 aaPredicted RBP17.37■□□□□ 0.37
FAM3A-222ENST00000621967 PCDH20Q8N6Y1 951 aaKnown RBP17.37■□□□□ 0.37
FAM3A-222ENST00000621967 FAM156AQ8NDB6 213 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 GPR150Q8NGU9 434 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 OR6P1Q8NGX9 317 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 CYP2S1Q96SQ9 504 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 SLC25A23Q9BV35 468 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 RNF38Q9H0F5 515 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 POLR3BQ9NW08 1133 aaPredicted RBP17.37■□□□□ 0.37
FAM3A-222ENST00000621967 UBAP1Q9NZ09 502 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 ADA2Q9NZK5 511 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 EPS15L1Q9UBC2 864 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 AP4B1Q9Y6B7 739 aa17.37■□□□□ 0.37
FAM3A-222ENST00000621967 SLC12A8A0AV02 714 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 OR51F1A6NGY5 319 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 CCL22O00626 93 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 OLFM2O95897 454 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 IGLV3-27P01718 113 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 SNRPB2P08579 225 aaKnown RBP17.36■□□□□ 0.37
FAM3A-222ENST00000621967 PMLP29590 882 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 GSTT1P30711 240 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 ACADVLP49748 655 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 SUOXP51687 545 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 HERVK_113P63132 956 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 TIAL1Q01085 375 aaKnown RBP eCLIP17.36■□□□□ 0.37
FAM3A-222ENST00000621967 TRAP1Q12931 704 aaKnown RBP17.36■□□□□ 0.37
FAM3A-222ENST00000621967 SERINC3Q13530 473 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 PARP15Q460N3 678 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 SPATA24Q86W54 205 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 SH3RF2Q8TEC5 729 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 PTERQ96BW5 349 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 DUS3LQ96G46 650 aaKnown RBP17.36■□□□□ 0.37
FAM3A-222ENST00000621967 FEM1CQ96JP0 617 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 NECTIN4Q96NY8 510 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 SLC22A12Q96S37 553 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 SH3GL3Q99963 347 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 ERVK-6Q9BXR3 956 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 SLC46A2Q9BY10 475 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 SMPD4Q9NXE4 827 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 CD300AQ9UGN4 299 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 KCTD3Q9Y597 815 aa17.36■□□□□ 0.37
FAM3A-222ENST00000621967 SMIM31A0A1B0GVY4 71 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 TTC24A2A3L6 582 aaPredicted RBP17.35■□□□□ 0.37
FAM3A-222ENST00000621967 SOBPA7XYQ1 873 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 RNASEH2AO75792 299 aaKnown RBP17.35■□□□□ 0.37
FAM3A-222ENST00000621967 HMBSP08397 361 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 CD1DP15813 335 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 KPNA1P52294 538 aaPredicted RBP17.35■□□□□ 0.37
FAM3A-222ENST00000621967 UGT3A2Q3SY77 523 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 ACBD5Q5T8D3 534 aaPredicted RBP17.35■□□□□ 0.37
FAM3A-222ENST00000621967 RAP1GAP2Q684P5 730 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 ZNF549Q6P9A3 640 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 PAOXQ6QHF9 649 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 PIM3Q86V86 326 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 CMTM8Q8IZV2 173 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 HLA-CQ95604 372 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 TRIM4Q9C037 500 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 POPDC3Q9HBV1 291 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 SPAG4Q9NPE6 437 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 CCDC167Q9P0B6 97 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 MTF2Q9Y483 593 aaPredicted RBP17.35■□□□□ 0.37
FAM3A-222ENST00000621967 GPC4O75487 556 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 FGF1P05230 155 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 HLA-DPA1P20036 260 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms