RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 SYVN1Q86TM6 617 aa11.72□□□□□ -0.53
C11orf54-215ENST00000617482 ZNF598Q86UK7 904 aaKnown RBP11.72□□□□□ -0.53
C11orf54-215ENST00000617482 ERI1Q8IV48 349 aaKnown RBP11.72□□□□□ -0.53
C11orf54-215ENST00000617482 DRAXINQ8NBI3 349 aaPredicted RBP11.72□□□□□ -0.53
C11orf54-215ENST00000617482 OR7D4Q8NG98 312 aa11.72□□□□□ -0.53
C11orf54-215ENST00000617482 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.72□□□□□ -0.53
C11orf54-215ENST00000617482 FUBP1Q96AE4 644 aaKnown RBP11.72□□□□□ -0.53
C11orf54-215ENST00000617482 TMEM125Q96AQ2 219 aa11.72□□□□□ -0.53
C11orf54-215ENST00000617482 CENPNQ96H22 339 aaPredicted RBP11.72□□□□□ -0.53
C11orf54-215ENST00000617482 FBXL20Q96IG2 436 aa11.72□□□□□ -0.53
C11orf54-215ENST00000617482 SPON2Q9BUD6 331 aa11.72□□□□□ -0.53
C11orf54-215ENST00000617482 DERL2Q9GZP9 239 aa11.72□□□□□ -0.53
C11orf54-215ENST00000617482 ALG2Q9H553 416 aa11.72□□□□□ -0.53
C11orf54-215ENST00000617482 CCSER2Q9H7U1 834 aa11.72□□□□□ -0.53
C11orf54-215ENST00000617482 SYTL2Q9HCH5 934 aa11.72□□□□□ -0.53
C11orf54-215ENST00000617482 TIMMDC1Q9NPL8 285 aa11.72□□□□□ -0.53
C11orf54-215ENST00000617482 TRPM7Q96QT4 1865 aa11.72□□□□□ -0.53
C11orf54-215ENST00000617482 PTPRDP23468 1912 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 A0A0U1RQS6 177 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 A0A1W2PP18 115 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 STK25O00506 426 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 OR1I1O60431 355 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 IGHA2P01877 340 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 HOXB8P17481 243 aaPredicted RBP11.71□□□□□ -0.53
C11orf54-215ENST00000617482 OGNP20774 298 aaKnown RBP11.71□□□□□ -0.53
C11orf54-215ENST00000617482 CTGFP29279 349 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 RGRP47804 291 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 CCT8P50990 548 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 KCNQ1P51787 676 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 TUBA4AP68366 448 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 LIPEQ05469 1076 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 TNK2Q07912 1038 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 PTPRRQ15256 657 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 RBBP7Q16576 425 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 PTPRNQ16849 979 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.53
C11orf54-215ENST00000617482 INTS11Q5TA45 600 aaKnown RBP11.71□□□□□ -0.53
C11orf54-215ENST00000617482 GLB1LQ6UWU2 654 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 C17orf99Q6UX52 265 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 RTN4RL1Q86UN2 441 aaPredicted RBP11.71□□□□□ -0.53
C11orf54-215ENST00000617482 ALDH16A1Q8IZ83 802 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 OFCC1Q8IZS5 231 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 LGI2Q8N0V4 545 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 MFSD2AQ8NA29 543 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 TTC16Q8NEE8 873 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 TRPV3Q8NET8 790 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 HM13Q8TCT9 377 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 GAB3Q8WWW8 586 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 KCTD14Q9BQ13 255 aaPredicted RBP11.71□□□□□ -0.53
C11orf54-215ENST00000617482 ZBED2Q9BTP6 218 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 HGH1Q9BTY7 390 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 SOX17Q9H6I2 414 aaPredicted RBP11.71□□□□□ -0.53
C11orf54-215ENST00000617482 SPC25Q9HBM1 224 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 POPDC3Q9HBV1 291 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 ZNF225Q9UK10 706 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 SQORQ9Y6N5 450 aa11.71□□□□□ -0.53
C11orf54-215ENST00000617482 CCDC154A6NI56 674 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 EI24O14681 340 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 NDST3O95803 873 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 EPOP01588 193 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 TRIM32Q13049 653 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 KCNA10Q16322 511 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 TYSND1Q2T9J0 566 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 CTXN3Q4LDR2 81 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 CLLU1OSQ5K130 101 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 IRAK1BP1Q5VVH5 260 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 CST9Q5W186 159 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 GLT6D1Q7Z4J2 308 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 CLVS1Q8IUQ0 354 aaPredicted RBP11.71□□□□□ -0.54
C11orf54-215ENST00000617482 SIDT2Q8NBJ9 832 aaKnown RBP11.71□□□□□ -0.54
C11orf54-215ENST00000617482 MDGA1Q8NFP4 955 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 OR2T11Q8NH01 316 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 FUBP3Q96I24 572 aaKnown RBP eCLIP11.71□□□□□ -0.54
C11orf54-215ENST00000617482 ZNF599Q96NL3 588 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 CDK15Q96Q40 435 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 SEPHS2Q99611 448 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 SEPT5Q99719 369 aaPredicted RBP11.71□□□□□ -0.54
C11orf54-215ENST00000617482 GALNT8Q9NY28 637 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 EBF1Q9UH73 591 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 TSR3Q9UJK0 312 aaKnown RBP11.71□□□□□ -0.54
C11orf54-215ENST00000617482 ASB1Q9Y576 335 aa11.71□□□□□ -0.54
C11orf54-215ENST00000617482 OAS3Q9Y6K5 1087 aaKnown RBP11.71□□□□□ -0.54
C11orf54-215ENST00000617482 LCHNA4D1U4 455 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 ACOX3O15254 700 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 SLC22A3O75751 556 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 BMP10O95393 424 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 TACR2P21452 398 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 MYF6P23409 242 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 PAX3P23760 479 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 ARL1P40616 181 aaPredicted RBP11.7□□□□□ -0.54
C11orf54-215ENST00000617482 HUNKP57058 714 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 YBEYP58557 167 aaPredicted RBP11.7□□□□□ -0.54
C11orf54-215ENST00000617482 SLC36A3Q495N2 470 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 TIGD2Q4W5G0 525 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 GPR141Q7Z602 305 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 PIANPQ8IYJ0 282 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 KIAA2013Q8IYS2 634 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 PACRGLQ8N7B6 248 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 MAGEE2Q8TD90 523 aaPredicted RBP11.7□□□□□ -0.54
C11orf54-215ENST00000617482 EEF1AKMT1Q8WVE0 214 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms