RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 USP41Q3LFD5 358 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SOWAHCQ53LP3 525 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 MAP1SQ66K74 1059 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 AMIGO1Q86WK6 493 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CDYL2Q8N8U2 506 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 OR10A6Q8NH74 314 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CLHC1Q8NHS4 586 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 LRRC20Q8TCA0 184 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PNPT1Q8TCS8 783 aaKnown RBP13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 TWIST2Q8WVJ9 160 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PXMP2Q9NR77 195 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 DDIT4Q9NX09 232 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ZNF224Q9NZL3 707 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ADAM28Q9UKQ2 775 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 TMX2Q9Y320 296 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SAGE2PA6NJ88 616 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SNTNA6NMZ2 147 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 NOS1APO75052 506 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PITX1P78337 314 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CDH17Q12864 832 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 NR6A1Q15406 480 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CCDC142Q17RM4 750 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ZNF404Q494X3 552 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 HHIPL2Q6UWX4 724 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ZC3HC1Q86WB0 502 aaKnown RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 LSMEM2Q8N112 164 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SVOPQ8N4V2 548 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CPSF7Q8N684 471 aaKnown RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SIPA1Q96FS4 1042 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SLC30A3Q99726 388 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 HOPXQ9BPY8 73 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 TNFRSF12AQ9NP84 129 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CCDC177Q9NQR7 707 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 NUFIP1Q9UHK0 495 aaKnown RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 TESMINQ9Y4I5 508 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 A8MT66 165 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 AP3D1O14617 1153 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SLC22A1O15245 554 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PEX10O60683 326 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PRKCGP05129 697 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CYP3A5P20815 502 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ICAM3P32942 547 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 LEPRP48357 1165 aaKnown RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 NR2C2P49116 596 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 YBX1P67809 324 aaKnown RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ADIGQ0VDE8 80 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 TMEM132DQ14C87 1099 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 BCL2A1Q16548 175 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 INTS11Q5TA45 600 aaKnown RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ZNF544Q6NX49 715 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 C16orf62Q7Z3J2 963 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PIM3Q86V86 326 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 FAM20CQ8IXL6 584 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 GALNT6Q8NCL4 622 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 Q96MT0 163 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 QKIQ96PU8 341 aaKnown RBP eCLIP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 RHNO1Q9BSD3 238 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 MALT1Q9UDY8 824 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 HSPB11Q9Y547 144 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CCDC162PA2VCL2 907 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 EFCAB10A6NFE3 127 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 C1QAP02745 245 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CRHBPP24387 322 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 AKR1D1P51857 326 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PPP5CP53041 499 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 AP3M2P53677 418 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 FCHO2Q0JRZ9 810 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 MED22Q15528 200 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ATP6AP1Q15904 470 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 TAF12Q16514 161 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CELF3Q5SZQ8 465 aaKnown RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 NCBP2-AS2Q69YL0 99 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 LYPD8Q6UX82 237 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 RAB43Q86YS6 212 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 STX19Q8N4C7 294 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PACRGLQ8N7B6 248 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 NSUN5Q96P11 429 aaKnown RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 HOXD1Q9GZZ0 328 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 KAT8Q9H7Z6 458 aaKnown RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ZFP14Q9HCL3 533 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 INTS10Q9NVR2 710 aaKnown RBP13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 UBIAD1Q9Y5Z9 338 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 GJA3Q9Y6H8 435 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 UTRNP46939 3433 aa13.93□□□□□ -0.18
TNFRSF11A-205ENST00000616710 H0YJX3 145 aa13.92□□□□□ -0.18
TNFRSF11A-205ENST00000616710 NUPL2O15504 423 aaKnown RBP13.92□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SSX4O60224 188 aa13.92□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CHRNA1P02708 482 aa13.92□□□□□ -0.18
TNFRSF11A-205ENST00000616710 STAG3L1P0CL83 205 aa13.92□□□□□ -0.18
TNFRSF11A-205ENST00000616710 RFTN1Q14699 578 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF11A-205ENST00000616710 TRNT1Q96Q11 434 aaKnown RBP13.92□□□□□ -0.18
TNFRSF11A-205ENST00000616710 EMILIN2Q9BXX0 1053 aa13.92□□□□□ -0.18
TNFRSF11A-205ENST00000616710 MMP28Q9H239 520 aa13.92□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ZMYM5Q9UJ78 669 aa13.92□□□□□ -0.18
TNFRSF11A-205ENST00000616710 EVPLLA8MZ36 301 aa13.92□□□□□ -0.18
TNFRSF11A-205ENST00000616710 BTN3A3O00478 584 aa13.92□□□□□ -0.18
TNFRSF11A-205ENST00000616710 MT-ND2P03891 347 aa13.92□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PRKCAP17252 672 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms