RNA–Protein interactions for RNA: ENST00000615676.1

YTHDF3-208, Transcript of YTH N6-methyladenosine RNA binding protein 3, human

TSL 1 (best)

Gene YTHDF3, Length 5,092 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YTHDF3-208	ENST00000615676	RIPK1	Q13546	671 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	SEMA5A	Q13591	1074 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	SLC26A9	Q7LBE3	791 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	SLC4A11	Q8NBS3	891 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PPP1R13L	Q8WUF5	828 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	TSSK3	Q96PN8	268 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	NIFK	Q9BYG3	293 aa	Known RBP	13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	SMURF2	Q9HAU4	748 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	CALML5	Q9NZT1	146 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	AP4B1	Q9Y6B7	739 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	TAF4	O00268	1085 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	IL12A	P29459	219 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	DLG2	Q15700	870 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	GCNT6	Q5T4J0	391 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PIK3R6	Q5UE93	754 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	FOXR1	Q6PIV2	292 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	ZNF730	Q6ZMV8	503 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	LEMD2	Q8NC56	503 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PJA1	Q8NG27	643 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	ACBD6	Q9BR61	282 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PCDHA2	Q9Y5H9	948 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	AK5	Q9Y6K8	562 aa		13.57	□□□□□ -0.24
YTHDF3-208	ENST00000615676	LRRC72	A6NJI9	287 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	MDM4	O15151	490 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	POP4	O95707	220 aa	Known RBP	13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	GSTT1	P30711	240 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	AKT2	P31751	481 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	SLC5A3	P53794	718 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	GRB14	Q14449	540 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	MYBPC3	Q14896	1274 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	IL17A	Q16552	155 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	RHBDF2	Q6PJF5	856 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	UNC5B	Q8IZJ1	945 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	SLC43A3	Q8NBI5	491 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	ADCY4	Q8NFM4	1077 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PSMA8	Q8TAA3	256 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	BRINP2	Q9C0B6	783 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	SLC25A51	Q9H1U9	297 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	ELOVL2	Q9NXB9	296 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PCDHGC3	Q9UN70	934 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	MRPS17	Q9Y2R5	130 aa	Known RBP	13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	GMFB	P60983	142 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	FOLH1	Q04609	750 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PPIG	Q13427	754 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	9e-10	■■■□□ 14.8
YTHDF3-208	ENST00000615676	VPS26B	Q4G0F5	336 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	TREML2	Q5T2D2	321 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	METTL21C	Q5VZV1	264 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	DAW1	Q8N136	415 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	RASGEF1C	Q8N431	466 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	EVL	Q9UI08	416 aa	Predicted RBP	13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	DUSP11	O75319	330 aa	Known RBP	13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	ENTPD5	O75356	428 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	RNASEH2A	O75792	299 aa	Known RBP	13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	AP2A1	O95782	977 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	EPHX1	P07099	455 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	SP100	P23497	879 aa	Predicted RBP	13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PSMD8	P48556	350 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	GRIK5	Q16478	980 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	FNBP1L	Q5T0N5	605 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	ALYREF	Q86V81	257 aa	Known RBP	13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	TTC29	Q8NA56	475 aa	Predicted RBP	13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	TRPM4	Q8TD43	1214 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	C2orf15	Q8WU43	125 aa	Known RBP	13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	RIT1	Q92963	219 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PACSIN3	Q9UKS6	424 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PADI3	Q9ULW8	664 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	DEPDC5	O75140	1603 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PBX3	P40426	434 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	LSM3	P62310	102 aa	Known RBP	13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	MED27	Q6P2C8	311 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	GET4	Q7L5D6	327 aa	Predicted RBP	13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	SNX20	Q7Z614	316 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	ZNF483	Q8TF39	744 aa	Predicted RBP	13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	CPXM1	Q96SM3	734 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PCBD2	Q9H0N5	130 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	DNAJC28	Q9NX36	388 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	EGFL7	Q9UHF1	273 aa		13.56	□□□□□ -0.24
YTHDF3-208	ENST00000615676	RBM47	A0AV96	593 aa	Known RBP	13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	WFS1	O76024	890 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	L1CAM	P32004	1257 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	STAR	P49675	285 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	RAB2A	P61019	212 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	USP4	Q13107	963 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	RAPSN	Q13702	412 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	SNAP47	Q5SQN1	464 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	UBR7	Q8N806	425 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	ATAD1	Q8NBU5	361 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	KCTD15	Q96SI1	283 aa	Predicted RBP	13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	WDR12	Q9GZL7	423 aa	Known RBP	13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	IFT80	Q9P2H3	777 aa	Predicted RBP	13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	ZNF222	Q9UK12	451 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	PTPRJ	Q12913	1337 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	CASK	O14936	926 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	NDST2	P52849	883 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	ERVK-21	P61565	698 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	GNA12	Q03113	381 aa		13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.55	□□□□□ -0.24
YTHDF3-208	ENST00000615676	SLC34A3	Q8N130	599 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms