RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 NPTX1Q15818 432 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 SUPT20HL1Q3ZLR7 823 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 GLYATQ6IB77 296 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 PMF1Q6P1K2 205 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 FAM183BPQ6ZVS7 135 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 TAS1R3Q7RTX0 852 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 SCUBE3Q8IX30 993 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 FBXO30Q8TB52 745 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 LPAR1Q92633 364 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 PHOX2BQ99453 314 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 NECTIN3Q9NQS3 549 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 EHD3Q9NZN3 535 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 EVLQ9UI08 416 aaPredicted RBP10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 USP22Q9UPT9 525 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 B8ZZF3 427 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 SLC1A7O00341 560 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 GSTA4O15217 222 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 GAS2O43903 313 aaKnown RBP10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 SSX4O60224 188 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 EPN2O95208 641 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 UQCRC1P31930 480 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 JAK3P52333 1124 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 POU6F2P78424 691 aaPredicted RBP10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 PTPN11Q06124 597 aaPredicted RBP10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 SELPLGQ14242 412 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 FKBP1CQ5VVH2 108 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 LCN8Q6JVE9 175 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 USP51Q70EK9 711 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 MIER2Q8N344 545 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZNF540Q8NDQ6 660 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 TOR1AIP2Q8NFQ8 470 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 OR6F1Q8NGZ6 308 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 ITFG1Q8TB96 612 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 STYXQ8WUJ0 223 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 CLEC4DQ8WXI8 215 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 SEPT1Q8WYJ6 367 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 LRRC58Q96CX6 371 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 P2RY11Q96G91 374 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 CLSTN3Q9BQT9 956 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 PDCD2LQ9BRP1 358 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 ACAT2Q9BWD1 397 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 QPCTLQ9NXS2 382 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 SNX6Q9UNH7 406 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 VWA7Q9Y334 891 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 PCDHA10Q9Y5I2 948 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 SNX8Q9Y5X2 465 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 hCG_2039718K7EN88 272 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 TSPAN4O14817 238 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 SLC6A2P23975 617 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 VGLL4Q14135 290 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 SIM2Q14190 667 aaPredicted RBP10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 TMEM132BQ14DG7 1078 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 PGM5Q15124 567 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 DPY19L1Q2PZI1 675 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 DENND5AQ6IQ26 1287 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 SYCE2Q6PIF2 218 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 B3GNT9Q6UX72 402 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 ILDR2Q71H61 639 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZNF438Q7Z4V0 828 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 GALNT5Q7Z7M9 940 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 FAM109AQ8N4B1 249 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 LRRC20Q8TCA0 184 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 PDZD7Q9H5P4 517 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 KAT8Q9H7Z6 458 aaKnown RBP10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 FAM118AQ9NWS6 357 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 DTLQ9NZJ0 730 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 C2CD4BA6NLJ0 364 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 ERVH48-1M5A8F1 160 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 KPNA6O60684 536 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 GABARAPO95166 117 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 ITGBL1O95965 494 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 HTR1AP08908 422 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 TCF3P15923 654 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 KCNK10P57789 538 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 FAM98BQ52LJ0 330 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 ARHGAP36Q6ZRI8 547 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 APOBEC3FQ8IUX4 373 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 AMER2Q8N7J2 671 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 PHF10Q8WUB8 498 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 PPP1R13LQ8WUF5 828 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 STON2Q8WXE9 905 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 NECTIN4Q96NY8 510 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 TAS2R9Q9NYW1 312 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 ANKRD6Q9Y2G4 727 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 PTGDR2Q9Y5Y4 395 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZFC3H1O60293 1989 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 INO80B-WBP1J3KQ70 363 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 RECQL5O94762 991 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 YES1P07947 543 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 VDRP11473 427 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 GOT1P17174 413 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 ATP5F1P24539 256 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 ARCN1P48444 511 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 YBX1P67809 324 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 TOP3AQ13472 1001 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 CLEC14AQ86T13 490 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 CDH24Q86UP0 819 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 OSTM1Q86WC4 334 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms