RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 STX7O15400 261 aaKnown RBP16.56■□□□□ 0.24
CBWD3-211ENST00000615061 ZNF8P17098 575 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-211ENST00000615061 ILF3Q12906 894 aaKnown RBP eCLIP16.56■□□□□ 0.24
CBWD3-211ENST00000615061 ILKQ13418 452 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 TAF1AQ15573 450 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-211ENST00000615061 CHRNA6Q15825 494 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 HES3Q5TGS1 186 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 DRICH1Q6PGQ1 229 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-211ENST00000615061 GALNT13Q8IUC8 556 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 RASGEF1CQ8N431 466 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 CCDC89Q8N998 374 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 BRSK1Q8TDC3 778 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 PATE1Q8WXA2 126 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 CNTNAP3BQ96NU0 1288 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 TMEM121BQ9BXQ6 578 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-211ENST00000615061 AP1M1Q9BXS5 423 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 GSDMCQ9BYG8 508 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 CNTNAP3Q9BZ76 1288 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 TAAR2Q9P1P5 351 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 VPS18Q9P253 973 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 PADI4Q9UM07 663 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 MSRB2Q9Y3D2 182 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 PKP3Q9Y446 797 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 COL27A1Q8IZC6 1860 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-211ENST00000615061 GLYATL1P3A0A0U1RQE8 302 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 FAM221BA6H8Z2 402 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 C1QTNF9BB2RNN3 333 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 CCL22O00626 93 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 NOBOXO60393 691 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 C1QTNF9P0C862 333 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 LPOP22079 712 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-211ENST00000615061 RPL22P35268 128 aaKnown RBP16.56■□□□□ 0.24
CBWD3-211ENST00000615061 GRIA1P42261 906 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 DUSP3P51452 185 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-211ENST00000615061 TMPRSS15P98073 1019 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 PDPK2PQ6A1A2 396 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 CHST15Q7LFX5 561 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-211ENST00000615061 ADGRG6Q86SQ4 1221 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 GPR156Q8NFN8 814 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 MAIP1Q8WWC4 291 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 PBKQ96KB5 322 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 OSBPL9Q96SU4 736 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 RAB6BQ9NRW1 208 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 FKBPLQ9UIM3 349 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 RABGEF1Q9UJ41 708 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 DRG1Q9Y295 367 aaKnown RBP16.56■□□□□ 0.24
CBWD3-211ENST00000615061 ZKSCAN5Q9Y2L8 839 aa16.56■□□□□ 0.24
CBWD3-211ENST00000615061 C2orf81A6NN90 581 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 ZNF185O15231 689 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 LDB2O43679 373 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 NUAK1O60285 661 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 ACTN2P35609 894 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 ACTR1BP42025 376 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 ACTR1AP61163 376 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 POU6F1Q14863 301 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 TTC27Q6P3X3 843 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 OGFOD3Q6PK18 319 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 CCNI2Q6ZMN8 369 aaPredicted RBP16.55■□□□□ 0.24
CBWD3-211ENST00000615061 PHYKPLQ8IUZ5 450 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 OR52K1Q8NGK4 314 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 GATA6Q92908 595 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 GLMNQ92990 594 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 TRIM39Q9HCM9 518 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 NCKIPSDQ9NZQ3 722 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 PIKFYVEQ9Y2I7 2098 aa16.55■□□□□ 0.24
CBWD3-211ENST00000615061 OPA1O60313 960 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 GP1BAP07359 652 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 RPIAP49247 311 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 ZNF140P52738 457 aaPredicted RBP16.54■□□□□ 0.24
CBWD3-211ENST00000615061 MAZP56270 477 aaKnown RBP16.54■□□□□ 0.24
CBWD3-211ENST00000615061 CRTC3Q6UUV7 619 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 GSTA5Q7RTV2 222 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 GALNT15Q8N3T1 639 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 GDAP1Q8TB36 358 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 MAPK15Q8TD08 544 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 VPS35Q96QK1 796 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 PAK5Q9P286 719 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 DSPP15924 2871 aaKnown RBP16.54■□□□□ 0.24
CBWD3-211ENST00000615061 CACNA1BQ00975 2339 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 CCDC78A2IDD5 438 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 GRID2O43424 1007 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 PRAMEF1O95521 474 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 CRTAMO95727 393 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 EML2O95834 649 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 ACP5P13686 325 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 JUPP14923 745 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 FDFT1P37268 417 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 CCDC173Q0VFZ6 552 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 SEMA5AQ13591 1074 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 TRIP13Q15645 432 aaPredicted RBP16.54■□□□□ 0.24
CBWD3-211ENST00000615061 PLA2G4EQ3MJ16 856 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 TMPRSS12Q86WS5 348 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 ZDHHC1Q8WTX9 485 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 NAT14Q8WUY8 206 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 CCDC74AQ96AQ1 378 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 LRRC45Q96CN5 670 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 CCDC3Q9BQI4 270 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 EVA1BQ9NVM1 165 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 SNX12Q9UMY4 172 aa16.54■□□□□ 0.24
CBWD3-211ENST00000615061 KCNK6Q9Y257 313 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms