RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 GEMP55040 296 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 GRIK2Q13002 908 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 ARHGEF7Q14155 803 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 PRPSAP1Q14558 356 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 FAM182AQ5T1J6 154 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 CGB2Q6NT52 195 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 CYS1Q717R9 158 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 ZNF534Q76KX8 674 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 RAVER1Q8IY67 606 aaKnown RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 BANPQ8N9N5 519 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 LPCAT1Q8NF37 534 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 SPATA22Q8NHS9 363 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 NETO1Q8TDF5 533 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 GRAMD1AQ96CP6 724 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 RMDN1Q96DB5 314 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 IFT43Q96FT9 208 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 KLHDC7BQ96G42 594 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 SIGLEC10Q96LC7 697 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 TRIB3Q96RU7 358 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 LYSMD1Q96S90 227 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 SRPK1Q96SB4 655 aaKnown RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 MLPHQ9BV36 600 aaPredicted RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 EDEM2Q9BV94 578 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 GBA3Q9H227 469 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 SPTBN4Q9H254 2564 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 ZNF180Q9UJW8 692 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 ANKRD6Q9Y2G4 727 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 AAR2Q9Y312 384 aaKnown RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 TMEM131Q92545 1883 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 IQANK1A0A1B0GTG1 560 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 LOC285095A0A1B0GVY8 99 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 CAPN8A6NHC0 703 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 NPIPB15A6NHN6 443 aaPredicted RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 TLR4O00206 839 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 FPGTO14772 594 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 WNT9AO14904 365 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 TM9SF1O15321 606 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 DFNA5O60443 496 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 PMPCBO75439 489 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 ANXA9O76027 345 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 SUN1O94901 812 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 NDST3O95803 873 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 CER1O95813 267 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 GSTA1P08263 222 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 MLNP12872 115 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 CTPS1P17812 591 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 SDHBP21912 280 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 HNF1BP35680 557 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 FDFT1P37268 417 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 CTSKP43235 329 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 WNT3AP56704 352 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 CDK16Q00536 496 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 SEMG2Q02383 582 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 SLC18A2Q05940 514 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 MTM1Q13496 603 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 SLC1A5Q15758 541 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 CNGA3Q16281 694 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 PCSK7Q16549 785 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 PDK4Q16654 411 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 SPRED3Q2MJR0 410 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 PARP6Q2NL67 630 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 KIF19Q2TAC6 998 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 KBTBD12Q3ZCT8 623 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 FAXCQ5TGI0 409 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 CRTC1Q6UUV9 634 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 KDELC1Q6UW63 502 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 KYAT3Q6YP21 454 aaKnown RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 GCNT7Q6ZNI0 430 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 SH2D5Q6ZV89 423 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 SPATA21Q7Z572 469 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 ABI3BPQ7Z7G0 1075 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 DCP2Q8IU60 420 aaKnown RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 C4orf33Q8N1A6 199 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 CBARPQ8N350 705 aaPredicted RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 MRRFQ96E11 262 aaKnown RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 MS4A3Q96HJ5 214 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 OXNAD1Q96HP4 312 aaPredicted RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 MRGPRX2Q96LB1 330 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 KLF6Q99612 283 aaPredicted RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 MYOCQ99972 504 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 PLCD4Q9BRC7 762 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 XAB2Q9HCS7 855 aaKnown RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 FZD3Q9NPG1 666 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 TMEM9BQ9NQ34 198 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 EIF2B3Q9NR50 452 aaKnown RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 RXFP3Q9NSD7 469 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 UBP1Q9NZI7 540 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 ZC3H7BQ9UGR2 993 aaKnown RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 GRID1Q9ULK0 1009 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 COQ6Q9Y2Z9 468 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 GOLGA4Q13439 2230 aaKnown RBP8.79□□□□□ -1
SMAD4-217ENST00000611848 ARID1BQ8NFD5 2236 aaPredicted RBP8.79□□□□□ -1
SMAD4-217ENST00000611848 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.79□□□□□ -1
SMAD4-217ENST00000611848 A8MX80 341 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 CDX4O14627 284 aaPredicted RBP8.79□□□□□ -1
SMAD4-217ENST00000611848 RAD51BO15315 384 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 GDF9O60383 454 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 RECQL5O94762 991 aaPredicted RBP8.79□□□□□ -1
SMAD4-217ENST00000611848 ALPIP09923 528 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 THEGLP0DJG4 465 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms