RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 AP1B1Q10567 949 aa18.57■□□□□ 0.56
PNKP-213ENST00000599543 KIF5AQ12840 1032 aa18.57■□□□□ 0.56
PNKP-213ENST00000599543 ZBTB17Q13105 803 aa18.57■□□□□ 0.56
PNKP-213ENST00000599543 QPCTQ16769 361 aa18.57■□□□□ 0.56
PNKP-213ENST00000599543 HENMT1Q5T8I9 393 aaKnown RBP18.57■□□□□ 0.56
PNKP-213ENST00000599543 MFSD7Q6UXD7 560 aa18.57■□□□□ 0.56
PNKP-213ENST00000599543 CHST15Q7LFX5 561 aaPredicted RBP18.57■□□□□ 0.56
PNKP-213ENST00000599543 PLD5Q8N7P1 536 aa18.57■□□□□ 0.56
PNKP-213ENST00000599543 CCDC112Q8NEF3 446 aa18.57■□□□□ 0.56
PNKP-213ENST00000599543 SLC37A2Q8TED4 501 aa18.57■□□□□ 0.56
PNKP-213ENST00000599543 SGF29Q96ES7 293 aa18.57■□□□□ 0.56
PNKP-213ENST00000599543 MED8Q96G25 268 aa18.57■□□□□ 0.56
PNKP-213ENST00000599543 AHCYL2Q96HN2 611 aaKnown RBP18.57■□□□□ 0.56
PNKP-213ENST00000599543 SLC38A3Q99624 504 aa18.57■□□□□ 0.56
PNKP-213ENST00000599543 MAK16Q9BXY0 300 aaKnown RBP18.57■□□□□ 0.56
PNKP-213ENST00000599543 B3GNT4Q9C0J1 378 aa18.57■□□□□ 0.56
PNKP-213ENST00000599543 FAM83DQ9H4H8 585 aa18.57■□□□□ 0.56
PNKP-213ENST00000599543 FLNBO75369 2602 aaKnown RBP18.56■□□□□ 0.56
PNKP-213ENST00000599543 RGSL1A5PLK6 1076 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 BTNL10A8MVZ5 291 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 ZNF487B1APH4 448 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 STMND1H3BQB6 276 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 APOL1O14791 398 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 DNAJC6O75061 913 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 FTCDO95954 541 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 PTMAP06454 111 aaKnown RBP18.56■□□□□ 0.56
PNKP-213ENST00000599543 CSF2RBP32927 897 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 CSTF2P33240 577 aaKnown RBP eCLIP18.56■□□□□ 0.56
PNKP-213ENST00000599543 DYNLT1P63172 113 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 SRSF6Q13247 344 aaKnown RBP18.56■□□□□ 0.56
PNKP-213ENST00000599543 GALNT3Q14435 633 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 GSE1Q14687 1217 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 ODF2Q5BJF6 829 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 VASH2Q86V25 355 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 VSIG1Q86XK7 387 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 SFRP1Q8N474 314 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 ZSCAN1Q8NBB4 408 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 AGBL5Q8NDL9 886 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 OR10G6Q8NH81 332 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 STN1Q9H668 368 aaKnown RBP18.56■□□□□ 0.56
PNKP-213ENST00000599543 GUCA1BQ9UMX6 200 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 PACSIN2Q9UNF0 486 aaPredicted RBP18.56■□□□□ 0.56
PNKP-213ENST00000599543 PRKAB1Q9Y478 270 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 OAS3Q9Y6K5 1087 aaKnown RBP18.56■□□□□ 0.56
PNKP-213ENST00000599543 CAPN6Q9Y6Q1 641 aa18.56■□□□□ 0.56
PNKP-213ENST00000599543 SETXQ7Z333 2677 aaKnown RBP18.56■□□□□ 0.56
PNKP-213ENST00000599543 TENM4Q6N022 2769 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 TRBV23OR9-2A0A075B6M9 112 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 FADS2P1A8MWK0 482 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 PPP1R12AO14974 1030 aaPredicted RBP18.55■□□□□ 0.56
PNKP-213ENST00000599543 DUX1O43812 170 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 THRAP10827 490 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 MPSTP25325 297 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 SQSTM1Q13501 440 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 PDK1Q15118 436 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 LRRC38Q5VT99 294 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 KAZNQ674X7 775 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 SLC9A4Q6AI14 798 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 NPNTQ6UXI9 565 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 B4GALNT4Q76KP1 1039 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 ZNF761Q86XN6 746 aaPredicted RBP18.55■□□□□ 0.56
PNKP-213ENST00000599543 DTX1Q86Y01 620 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 RFX6Q8HWS3 928 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 CNTD1Q8N815 330 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 LRRC57Q8N9N7 239 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 TAAR9Q96RI9 348 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 WDR24Q96S15 920 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 CEP41Q9BYV8 373 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 RMI1Q9H9A7 625 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 ZFYVE1Q9HBF4 777 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 LZTFL1Q9NQ48 299 aa18.55■□□□□ 0.56
PNKP-213ENST00000599543 CNOT6Q9ULM6 557 aaKnown RBP18.55■□□□□ 0.56
PNKP-213ENST00000599543 TLN1Q9Y490 2541 aaKnown RBP18.55■□□□□ 0.56
PNKP-213ENST00000599543 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.54■□□□□ 0.56
PNKP-213ENST00000599543 PSTPIP1O43586 416 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 SLC4A1P02730 911 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 FGF3P11487 239 aaPredicted RBP18.54■□□□□ 0.56
PNKP-213ENST00000599543 ACP5P13686 325 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 ZFXP17010 805 aaPredicted RBP18.54■□□□□ 0.56
PNKP-213ENST00000599543 HHEXQ03014 270 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 TMEM71Q6P5X7 295 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 LYSMD3Q7Z3D4 306 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 NT5DC3Q86UY8 548 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 AGAP3Q96P47 875 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 HERPUD2Q9BSE4 406 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 SPATA16Q9BXB7 569 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 KCNF1Q9H3M0 494 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 DDX56Q9NY93 547 aaKnown RBP18.54■□□□□ 0.56
PNKP-213ENST00000599543 TMEM9Q9P0T7 183 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 KCNK6Q9Y257 313 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 PCDHGA4Q9Y5G9 962 aa18.54■□□□□ 0.56
PNKP-213ENST00000599543 PCYT1BQ9Y5K3 369 aaPredicted RBP18.54■□□□□ 0.56
PNKP-213ENST00000599543 B8ZZF3 427 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 EML2O95834 649 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 ITGB2P05107 769 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 SLC2A4P14672 509 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 ATP1A2P50993 1020 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 NFATC2Q13469 925 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 ZNF569Q5MCW4 686 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms