RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 BPIFA1Q9NP55 256 aa12.03□□□□□ -0.48
LIG1-217ENST00000599165 IL17CQ9P0M4 197 aa12.03□□□□□ -0.48
LIG1-217ENST00000599165 TBC1D29Q9UFV1 150 aa12.03□□□□□ -0.48
LIG1-217ENST00000599165 SLC23A2Q9UGH3 650 aa12.03□□□□□ -0.48
LIG1-217ENST00000599165 R3HDM2Q9Y2K5 976 aaKnown RBP12.03□□□□□ -0.48
LIG1-217ENST00000599165 PCDHGA8Q9Y5G5 932 aa12.03□□□□□ -0.48
LIG1-217ENST00000599165 SMG1Q96Q15 3661 aaKnown RBP12.02□□□□□ -0.48
LIG1-217ENST00000599165 H7C0C1 242 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 CHUKO15111 745 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 NUAK1O60285 661 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 MTX2O75431 263 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 IPO7O95373 1038 aaKnown RBP12.02□□□□□ -0.49
LIG1-217ENST00000599165 ASMTLO95671 621 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 AGTP01019 485 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 RBP3P10745 1247 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 HGFP14210 728 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 CD1CP29017 333 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 CSF2RBP32927 897 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 HMGCLP35914 325 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 ATP5OP48047 213 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 NAP1L1P55209 391 aaKnown RBP12.02□□□□□ -0.49
LIG1-217ENST00000599165 EIF3EP60228 445 aaKnown RBP12.02□□□□□ -0.49
LIG1-217ENST00000599165 MPP3Q13368 585 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 LRP8Q14114 963 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 ATP13A5Q4VNC0 1218 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.02□□□□□ -0.49
LIG1-217ENST00000599165 RANBP10Q6VN20 620 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 MICALCLQ6ZW33 695 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 PDZD3Q86UT5 571 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 ZNF547Q8IVP9 402 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 SFRP1Q8N474 314 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 SLC37A2Q8TED4 501 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 GLYATL1Q969I3 302 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 HES6Q96HZ4 224 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 ZNF578Q96N58 590 aaPredicted RBP12.02□□□□□ -0.49
LIG1-217ENST00000599165 SLC46A1Q96NT5 459 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 NUDT22Q9BRQ3 303 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 ANP32EQ9BTT0 268 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 ZSCAN5AQ9BUG6 496 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 SPATA16Q9BXB7 569 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 GPR63Q9BZJ6 419 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 CARD9Q9H257 536 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 SEMA6CQ9H3T2 930 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 RDH14Q9HBH5 336 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 IL26Q9NPH9 171 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 RSPH14Q9UHP6 348 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 TRHDEQ9UKU6 1024 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 KCNK6Q9Y257 313 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 MGAQ8IWI9 3026 aa12.02□□□□□ -0.49
LIG1-217ENST00000599165 SDK2Q58EX2 2172 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 CCDC187A0A096LP49 1063 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 BUD23O43709 281 aaKnown RBP12.01□□□□□ -0.49
LIG1-217ENST00000599165 ACP5P13686 325 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 PSMB4P28070 264 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 ACTN2P35609 894 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 FASLGP48023 281 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 INHBCP55103 352 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 GDF10P55107 478 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 ERVPABLB-1P60509 514 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 TLE3Q04726 772 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 KIF5AQ12840 1032 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 C16orf72Q14CZ0 275 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 ZNF569Q5MCW4 686 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 ANKRD20A2Q5SQ80 823 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 ANKRD20A1Q5TYW2 823 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 ANKRD20A3Q5VUR7 823 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 PDPK2PQ6A1A2 396 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 DENND5AQ6IQ26 1287 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 CHST15Q7LFX5 561 aaPredicted RBP12.01□□□□□ -0.49
LIG1-217ENST00000599165 PEX26Q7Z412 305 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 C11orf96Q7Z7L8 435 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 CLEC14AQ86T13 490 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 ZNF761Q86XN6 746 aaPredicted RBP12.01□□□□□ -0.49
LIG1-217ENST00000599165 SPACA3Q8IXA5 215 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 WDR36Q8NI36 951 aaKnown RBP12.01□□□□□ -0.49
LIG1-217ENST00000599165 SLC35B2Q8TB61 432 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 CCDC110Q8TBZ0 833 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 SPATA13Q96N96 652 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 PLEKHG4BQ96PX9 1271 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 VPS35Q96QK1 796 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 APOL2Q9BQE5 337 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 OR2AG1Q9H205 316 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 RMI1Q9H9A7 625 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 TRIM39Q9HCM9 518 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 SCHIP1Q9P0W5 487 aaPredicted RBP12.01□□□□□ -0.49
LIG1-217ENST00000599165 ZNHIT2Q9UHR6 403 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 AMFRQ9UKV5 643 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 KCTD3Q9Y597 815 aa12.01□□□□□ -0.49
LIG1-217ENST00000599165 BPTFQ12830 3046 aa12□□□□□ -0.49
LIG1-217ENST00000599165 TRBV23OR9-2A0A075B6M9 112 aa12□□□□□ -0.49
LIG1-217ENST00000599165 IGHV1OR21-1A0A087WYE8 117 aa12□□□□□ -0.49
LIG1-217ENST00000599165 KCNN4O15554 427 aa12□□□□□ -0.49
LIG1-217ENST00000599165 GRID2O43424 1007 aa12□□□□□ -0.49
LIG1-217ENST00000599165 TNFSF15O95150 251 aa12□□□□□ -0.49
LIG1-217ENST00000599165 SLC25A14O95258 325 aaPredicted RBP12□□□□□ -0.49
LIG1-217ENST00000599165 HLA-DPA1P20036 260 aa12□□□□□ -0.49
LIG1-217ENST00000599165 UGT1A5P35504 534 aa12□□□□□ -0.49
LIG1-217ENST00000599165 ETV5P41161 510 aa12□□□□□ -0.49
LIG1-217ENST00000599165 CCDC173Q0VFZ6 552 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms