RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 CNGA4Q8IV77 575 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 RHOT1Q8IXI2 618 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 TADA1Q96BN2 335 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 AHCYL2Q96HN2 611 aaKnown RBP13.15□□□□□ -0.3
APOC1-209ENST00000592885 TEFMQ96QE5 360 aaKnown RBP13.15□□□□□ -0.3
APOC1-209ENST00000592885 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.15□□□□□ -0.3
APOC1-209ENST00000592885 ASPSCR1Q9BZE9 553 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 ZMYND15Q9H091 742 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 SLC25A51Q9H1U9 297 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 ZNHIT2Q9UHR6 403 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 PLEKHM1Q9Y4G2 1056 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 PCDHGA4Q9Y5G9 962 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 OAS3Q9Y6K5 1087 aaKnown RBP13.15□□□□□ -0.3
APOC1-209ENST00000592885 ZNF462Q96JM2 2506 aa13.15□□□□□ -0.3
APOC1-209ENST00000592885 SDK2Q58EX2 2172 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 B8ZZF3 427 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 NUAK1O60285 661 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 ATP1A1P05023 1023 aaKnown RBP13.14□□□□□ -0.31
APOC1-209ENST00000592885 FGF3P11487 239 aaPredicted RBP13.14□□□□□ -0.31
APOC1-209ENST00000592885 CCL4P13236 92 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 F3P13726 295 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 NR2C2P49116 596 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 GALNT3Q14435 633 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 IYDQ6PHW0 289 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 TRAM1L1Q8N609 369 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 RCBTB1Q8NDN9 531 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 SEMA4CQ9C0C4 833 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 NHEJ1Q9H9Q4 299 aaPredicted RBP13.14□□□□□ -0.31
APOC1-209ENST00000592885 UCK1Q9HA47 277 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 WDR70Q9NW82 654 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 ADGRG1Q9Y653 693 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 ATMQ13315 3056 aa13.14□□□□□ -0.31
APOC1-209ENST00000592885 A0A0A6YYK5 440 aaPredicted RBP13.13□□□□□ -0.31
APOC1-209ENST00000592885 LILRA5A6NI73 299 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 J3QKU1 62 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 GRID2O43424 1007 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 PSTPIP1O43586 416 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 SFTPCP11686 197 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 ACP5P13686 325 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 CDK18Q07002 472 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 TFDP2Q14188 446 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 NKAIN2Q5VXU1 208 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 TMC3Q7Z5M5 1100 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 RFX6Q8HWS3 928 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 LRRN4Q8WUT4 740 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 ZPBPQ9BS86 351 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 SPATA16Q9BXB7 569 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 TRIM39Q9HCM9 518 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 SPTLC3Q9NUV7 552 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 TBC1D29Q9UFV1 150 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 KCNK6Q9Y257 313 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 ZNF711Q9Y462 761 aa13.13□□□□□ -0.31
APOC1-209ENST00000592885 PCYT1BQ9Y5K3 369 aaPredicted RBP13.13□□□□□ -0.31
APOC1-209ENST00000592885 CHUKO15111 745 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 MTSS1O43312 755 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 VEGFDO43915 354 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 SLC25A14O95258 325 aaPredicted RBP13.12□□□□□ -0.31
APOC1-209ENST00000592885 NDST3O95803 873 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 EML2O95834 649 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 HADHBP55084 474 aaKnown RBP13.12□□□□□ -0.31
APOC1-209ENST00000592885 PRKD1Q15139 912 aaPredicted RBP13.12□□□□□ -0.31
APOC1-209ENST00000592885 TEX44Q53QW1 395 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 DCAF12Q5T6F0 453 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 CCDC70Q6NSX1 233 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 ARHGAP22Q7Z5H3 698 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 VASH2Q86V25 355 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 ART4Q93070 314 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 GLYATL1Q969I3 302 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 EID2BQ96D98 161 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 AGAP3Q96P47 875 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 PLEKHG4BQ96PX9 1271 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 VPS35Q96QK1 796 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 CHP1Q99653 195 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 ARHGAP9Q9BRR9 750 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 TIMM29Q9BSF4 260 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 GPR63Q9BZJ6 419 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 GLOD4Q9HC38 313 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 TMEM9Q9P0T7 183 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 ATXN10Q9UBB4 475 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 PRKAB1Q9Y478 270 aa13.12□□□□□ -0.31
APOC1-209ENST00000592885 MN1Q10571 1320 aaPredicted RBP13.12□□□□□ -0.31
APOC1-209ENST00000592885 EFCAB7A8K855 629 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 AGRPO00253 132 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 KMOO15229 486 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 CAPN5O15484 640 aaPredicted RBP13.11□□□□□ -0.31
APOC1-209ENST00000592885 SPOPO43791 374 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 ANKRD34CP0C6C1 535 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 ZNF8P17098 575 aaPredicted RBP13.11□□□□□ -0.31
APOC1-209ENST00000592885 XRCC1P18887 633 aaPredicted RBP13.11□□□□□ -0.31
APOC1-209ENST00000592885 CDKN2BP42772 138 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 PPM1FP49593 454 aaPredicted RBP13.11□□□□□ -0.31
APOC1-209ENST00000592885 ARSDP51689 593 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 UBE2IP63279 158 aaKnown RBP13.11□□□□□ -0.31
APOC1-209ENST00000592885 SRSF6Q13247 344 aaKnown RBP13.11□□□□□ -0.31
APOC1-209ENST00000592885 NFATC2Q13469 925 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 PCSK7Q16549 785 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 TAZQ16635 292 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 LINC00303Q3SY05 128 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 ZDHHC20Q5W0Z9 365 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 NPNTQ6UXI9 565 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms