RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 ARL4AP40617 200 aa19.39■□□□□ 0.69
PRKCSH-216ENST00000592445 GARSP41250 739 aaKnown RBP19.39■□□□□ 0.69
PRKCSH-216ENST00000592445 PGDP52209 483 aa19.39■□□□□ 0.69
PRKCSH-216ENST00000592445 STC1P52823 247 aa19.39■□□□□ 0.69
PRKCSH-216ENST00000592445 CDH6P55285 790 aa19.39■□□□□ 0.69
PRKCSH-216ENST00000592445 DNASE1L3Q13609 305 aa19.39■□□□□ 0.69
PRKCSH-216ENST00000592445 CYP4V2Q6ZWL3 525 aaPredicted RBP19.39■□□□□ 0.69
PRKCSH-216ENST00000592445 APLFQ8IW19 511 aaPredicted RBP19.39■□□□□ 0.69
PRKCSH-216ENST00000592445 CUEDC1Q9NWM3 386 aaPredicted RBP19.39■□□□□ 0.69
PRKCSH-216ENST00000592445 TAS2R14Q9NYV8 317 aa19.39■□□□□ 0.69
PRKCSH-216ENST00000592445 PCDHGA6Q9Y5G7 932 aa19.39■□□□□ 0.69
PRKCSH-216ENST00000592445 TOX3O15405 576 aaPredicted RBP19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 FZD6O60353 706 aa19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 UBXN7O94888 489 aa19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 C9P02748 559 aa19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 MT-ND3P03897 115 aa19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 SEMA5AQ13591 1074 aa19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 CT47A1Q5JQC4 288 aaPredicted RBP19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 PPP1R2P3Q6NXS1 205 aa19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 TRIM48Q8IWZ4 208 aa19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 TRIM55Q9BYV6 548 aa19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 OSGEPL1Q9H4B0 414 aa19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 ZNF768Q9H5H4 540 aaKnown RBP19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 ETNK2Q9NVF9 386 aa19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 OGFRQ9NZT2 677 aa19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 RCOR3Q9P2K3 495 aaPredicted RBP19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 DNPEPQ9ULA0 475 aa19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 CNOT6Q9ULM6 557 aaKnown RBP19.38■□□□□ 0.69
PRKCSH-216ENST00000592445 PRRC2CQ9Y520 2896 aaKnown RBP19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 TMEM191CA6NGB0 347 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 GRID2O43424 1007 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 SPAG6O75602 509 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 CLDN7O95471 211 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 RECKO95980 971 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 VIPP01282 170 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 CCDC172P0C7W6 258 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 UBE2IP63279 158 aaKnown RBP19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 NADK2Q4G0N4 442 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 PLEKHA7Q6IQ23 1121 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 TMEM26Q6ZUK4 368 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 CT55Q8WUE5 264 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 PLEKHG4BQ96PX9 1271 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 TRIM7Q9C029 511 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 UCK1Q9HA47 277 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 LHX9Q9NQ69 397 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 CASS4Q9NQ75 786 aa19.37■□□□□ 0.69
PRKCSH-216ENST00000592445 LRCH4O75427 683 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 RNF224P0DH78 156 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 FGF5P12034 268 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 FERP16591 822 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 SERPINB6P35237 376 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 LEPRP48357 1165 aaKnown RBP19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 SMTNL2Q2TAL5 461 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 CDKAL1Q5VV42 579 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 PPP1R3BQ86XI6 285 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 ENOX1Q8TC92 643 aaKnown RBP19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 HSPH1Q92598 858 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 SLC25A23Q9BV35 468 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 POLR1EQ9GZS1 481 aaKnown RBP19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 FAM83DQ9H4H8 585 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 ACTL8Q9H568 366 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 KLC4Q9NSK0 619 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 CHKBQ9Y259 395 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 MAP4K5Q9Y4K4 846 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 SLC30A1Q9Y6M5 507 aa19.36■□□□□ 0.69
PRKCSH-216ENST00000592445 FADS2P1A8MWK0 482 aa19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 C21orf140B9A014 251 aa19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 NUAK1O60285 661 aa19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 ATP1A3P13637 1013 aa19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 XRCC1P18887 633 aaPredicted RBP19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 DPYSL2Q16555 572 aa19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 CACHD1Q5VU97 1274 aa19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 CYB5D1Q6P9G0 228 aa19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 POLNQ7Z5Q5 900 aa19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 RAVER1Q8IY67 606 aaKnown RBP19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 SEC14L1Q92503 715 aa19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 CSPG4P5Q96PW8 444 aa19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 CARD9Q9H257 536 aa19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 TTLL3Q9Y4R7 772 aa19.35■□□□□ 0.69
PRKCSH-216ENST00000592445 C1orf232A0A0U1RR37 186 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 GOLGA6L3A6NEY3 463 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 KIF1CO43896 1103 aaKnown RBP19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 MTA2O94776 668 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 DDAH2O95865 285 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 UBXN1Q04323 297 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 ZNF787Q6DD87 383 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 FAM92BQ6ZTR7 304 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 PRSS42Q7Z5A4 293 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 TEX26Q8N6G2 289 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 AOPEPQ8N6M6 819 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 LPCAT1Q8NF37 534 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 THAP4Q8WY91 577 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 OR2AG1Q9H205 316 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 PDE7BQ9NP56 450 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 ARFGAP3Q9NP61 516 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 ACSS2Q9NR19 701 aa19.34■□□□□ 0.69
PRKCSH-216ENST00000592445 PKD2L2Q9NZM6 624 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms