RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 VAT1Q99536 393 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 SLC38A3Q99624 504 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 CHP1Q99653 195 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 NUDT22Q9BRQ3 303 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 DDA1Q9BW61 102 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 SEMA6CQ9H3T2 930 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 TRABDQ9H4I3 376 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 UCK1Q9HA47 277 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 SARS2Q9NP81 518 aaKnown RBP7.53□□□□□ -1.2
NPC1-208ENST00000590301 PDP2Q9P2J9 529 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 ZNHIT2Q9UHR6 403 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 CNOT6Q9ULM6 557 aaKnown RBP7.53□□□□□ -1.2
NPC1-208ENST00000590301 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.53□□□□□ -1.2
NPC1-208ENST00000590301 ST14Q9Y5Y6 855 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 GOLGA4Q13439 2230 aaKnown RBP7.53□□□□□ -1.2
NPC1-208ENST00000590301 TRPM6Q9BX84 2022 aa7.52□□□□□ -1.2
NPC1-208ENST00000590301 BPTFQ12830 3046 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 A0A0A6YYK5 440 aaPredicted RBP7.52□□□□□ -1.21
NPC1-208ENST00000590301 PRAMEF33A0A0G2JMD5 474 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 A6NCN8 305 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 STMND1H3BQB6 276 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 CASC3O15234 703 aaKnown RBP7.52□□□□□ -1.21
NPC1-208ENST00000590301 PPM1DO15297 605 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 GRID2O43424 1007 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 VEGFDO43915 354 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 NUAK1O60285 661 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 PRAMEF10O60809 474 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 PPFIA2O75334 1257 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 ZNF189O75820 626 aaPredicted RBP7.52□□□□□ -1.21
NPC1-208ENST00000590301 ZRANB2O95218 330 aaKnown RBP eCLIP7.52□□□□□ -1.21
NPC1-208ENST00000590301 ITGB2P05107 769 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 THRAP10827 490 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 HGFP14210 728 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 CDKN2BP42772 138 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 MAPK10P53779 464 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 HHEXQ03014 270 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 C16orf72Q14CZ0 275 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 PRKD1Q15139 912 aaPredicted RBP7.52□□□□□ -1.21
NPC1-208ENST00000590301 TFDP3Q5H9I0 405 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 C11orf63Q6NUN7 778 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 TMEM71Q6P5X7 295 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 IYDQ6PHW0 289 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 USP53Q70EK8 1073 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 CHST15Q7LFX5 561 aaPredicted RBP7.52□□□□□ -1.21
NPC1-208ENST00000590301 TMPRSS9Q7Z410 1059 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 TMC3Q7Z5M5 1100 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 DTX1Q86Y01 620 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 CCDC170Q8IYT3 715 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 KATNAL2Q8IYT4 538 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 TFB1MQ8WVM0 346 aaKnown RBP7.52□□□□□ -1.21
NPC1-208ENST00000590301 TTC9Q92623 222 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 USP7Q93009 1102 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 GLYATL1Q969I3 302 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 SGF29Q96ES7 293 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 MED8Q96G25 268 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 AHCYL2Q96HN2 611 aaKnown RBP7.52□□□□□ -1.21
NPC1-208ENST00000590301 RBM41Q96IZ5 413 aaKnown RBP7.52□□□□□ -1.21
NPC1-208ENST00000590301 CCDC74BQ96LY2 380 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 TEKT5Q96M29 485 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 AGAP3Q96P47 875 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 PLEKHG4BQ96PX9 1271 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 TEFMQ96QE5 360 aaKnown RBP7.52□□□□□ -1.21
NPC1-208ENST00000590301 SMIM14Q96QK8 99 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 TAAR9Q96RI9 348 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 WDR24Q96S15 920 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 FERMT1Q9BQL6 677 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 ZPBPQ9BS86 351 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 SPATA16Q9BXB7 569 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 GPR63Q9BZJ6 419 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 RDH14Q9HBH5 336 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 GLOD4Q9HC38 313 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 TRIM39Q9HCM9 518 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.52□□□□□ -1.21
NPC1-208ENST00000590301 HACD3Q9P035 362 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 TBC1D29Q9UFV1 150 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 FAM153AQ9UHL3 310 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 PTPRQQ9UMZ3 2332 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 ADAMTS20P59510 1910 aa7.52□□□□□ -1.21
NPC1-208ENST00000590301 A0A0U1RQS6 177 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 LILRA5A6NI73 299 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 FADS2P1A8MWK0 482 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 HACD1B0YJ81 288 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 C9orf172C9J069 976 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 CHUKO15111 745 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 KMOO15229 486 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 CAPN5O15484 640 aaPredicted RBP7.51□□□□□ -1.21
NPC1-208ENST00000590301 KCNJ13O60928 360 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 C1QL1O75973 258 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 SLC25A14O95258 325 aaPredicted RBP7.51□□□□□ -1.21
NPC1-208ENST00000590301 IPO7O95373 1038 aaKnown RBP7.51□□□□□ -1.21
NPC1-208ENST00000590301 LCA5LO95447 670 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 ATP1A1P05023 1023 aaKnown RBP7.51□□□□□ -1.21
NPC1-208ENST00000590301 SFTPCP11686 197 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 F3P13726 295 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 VCLP18206 1134 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 ITIH1P19827 911 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 COMTP21964 271 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 PTPN3P26045 913 aa7.51□□□□□ -1.21
NPC1-208ENST00000590301 CYLC1P35663 651 aaPredicted RBP7.51□□□□□ -1.21
NPC1-208ENST00000590301 MAGEA1P43355 309 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms