RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 CCDC168Q8NDH2 2452 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 SSU72P8A0A1W2PR75 194 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 USP27XA6NNY8 438 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 WASH4PA8MWX3 477 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 EIF3CLB5ME19 914 aaKnown RBP8.48□□□□□ -1.05
SDF2-204ENST00000587338 TRAFD1O14545 582 aaPredicted RBP8.48□□□□□ -1.05
SDF2-204ENST00000587338 FGF10O15520 208 aaPredicted RBP8.48□□□□□ -1.05
SDF2-204ENST00000587338 HEXIM1O94992 359 aaKnown RBP8.48□□□□□ -1.05
SDF2-204ENST00000587338 CPP00450 1065 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 CCNYL3P0C7X3 344 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 VIPR1P32241 457 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 PRKCIP41743 596 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 MAGEA1P43355 309 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 GPR1P46091 355 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 SEPHS1P49903 392 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 PAPOLAP51003 745 aaKnown RBP8.48□□□□□ -1.05
SDF2-204ENST00000587338 SCNN1BP51168 640 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 EPHA4P54764 986 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 GFERP55789 205 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 SH3BP2P78314 561 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 LRP8Q14114 963 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 PYCR3Q53H96 274 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 CCDC122Q5T0U0 273 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 SCYL2Q6P3W7 929 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 Q6ZVL8 140 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 LYSMD3Q7Z3D4 306 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 GALNT13Q8IUC8 556 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 CT55Q8WUE5 264 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 SLC20A1Q8WUM9 679 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 CENPIQ92674 756 aaPredicted RBP8.48□□□□□ -1.05
SDF2-204ENST00000587338 MOCOSQ96EN8 888 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 OR6C1Q96RD1 312 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 EIF3CQ99613 913 aaKnown RBP8.48□□□□□ -1.05
SDF2-204ENST00000587338 AGPAT1Q99943 283 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 C11orf70Q9BRQ4 267 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 MFRPQ9BY79 579 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 ACTL8Q9H568 366 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 LRRC19Q9H756 370 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 SP110Q9HB58 689 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 SARS2Q9NP81 518 aaKnown RBP8.48□□□□□ -1.05
SDF2-204ENST00000587338 SLAMF7Q9NQ25 335 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 LUC7LQ9NQ29 371 aaKnown RBP8.48□□□□□ -1.05
SDF2-204ENST00000587338 KCTD5Q9NXV2 234 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 DONSONQ9NYP3 566 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 CNOT8Q9UFF9 292 aaKnown RBP8.48□□□□□ -1.05
SDF2-204ENST00000587338 CD84Q9UIB8 345 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 ADGRG1Q9Y653 693 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 HIVEP1P15822 2718 aa8.48□□□□□ -1.05
SDF2-204ENST00000587338 ZFHX3Q15911 3703 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 A0A087X0T9 212 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 TTC24A2A3L6 582 aaPredicted RBP8.47□□□□□ -1.05
SDF2-204ENST00000587338 WIPF3A6NGB9 483 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 NPIPB15A6NHN6 443 aaPredicted RBP8.47□□□□□ -1.05
SDF2-204ENST00000587338 ARHGAP42A6NI28 874 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 ARGFXA6NJG6 315 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 SNX2O60749 519 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 LRCH4O75427 683 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 ANKRD34CP0C6C1 535 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 FAM228BP0C875 321 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 KRT3P12035 628 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 GPD1P21695 349 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 LHCGRP22888 699 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 MMP8P22894 467 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 TEAD1P28347 426 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 GARSP41250 739 aaKnown RBP8.47□□□□□ -1.05
SDF2-204ENST00000587338 CCL11P51671 97 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 NDST2P52849 883 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 TPI1P60174 286 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 AP1S1P61966 158 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 DNTTIP2Q5QJE6 756 aaKnown RBP8.47□□□□□ -1.05
SDF2-204ENST00000587338 SMYD5Q6GMV2 418 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 SLC9B2Q86UD5 537 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 PLXDC1Q8IUK5 500 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 LZTR1Q8N653 840 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 SLC30A5Q8TAD4 765 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 EPS8L1Q8TE68 723 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 SH3KBP1Q96B97 665 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 SCARF2Q96GP6 870 aaPredicted RBP8.47□□□□□ -1.05
SDF2-204ENST00000587338 C9orf72Q96LT7 481 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 NSMCE3Q96MG7 304 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 C5orf34Q96MH7 638 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 TGM7Q96PF1 710 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 TBC1D10AQ9BXI6 508 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 LZTFL1Q9NQ48 299 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 ACSS2Q9NR19 701 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 TBC1D29Q9UFV1 150 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 PADI1Q9ULC6 663 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 TFR2Q9UP52 801 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 KCNK6Q9Y257 313 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 PRKAB1Q9Y478 270 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 PCDHGC4Q9Y5F7 938 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 PCDHGA6Q9Y5G7 932 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 PCDHA13Q9Y5I0 950 aa8.47□□□□□ -1.05
SDF2-204ENST00000587338 MN1Q10571 1320 aaPredicted RBP8.47□□□□□ -1.05
SDF2-204ENST00000587338 A0A0U1RQS6 177 aa8.46□□□□□ -1.06
SDF2-204ENST00000587338 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.46□□□□□ -1.06
SDF2-204ENST00000587338 GOLGA6L9A6NEM1 432 aa8.46□□□□□ -1.06
SDF2-204ENST00000587338 PSMD11O00231 422 aa8.46□□□□□ -1.06
SDF2-204ENST00000587338 DFFAO00273 331 aa8.46□□□□□ -1.06
SDF2-204ENST00000587338 DDX3XO00571 662 aaKnown RBP eCLIP8.46□□□□□ -1.062e-8■■□□□ 13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms