RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 CES3Q6UWW8 571 aa12.51□□□□□ -0.41
RETREG3-203ENST00000585894 ADGRG6Q86SQ4 1221 aa12.51□□□□□ -0.41
RETREG3-203ENST00000585894 CAND1Q86VP6 1230 aaKnown RBP12.51□□□□□ -0.41
RETREG3-203ENST00000585894 SFTPA2Q8IWL1 248 aa12.51□□□□□ -0.41
RETREG3-203ENST00000585894 NAT8LQ8N9F0 302 aa12.51□□□□□ -0.41
RETREG3-203ENST00000585894 GDAP1Q8TB36 358 aa12.51□□□□□ -0.41
RETREG3-203ENST00000585894 BTN2A2Q8WVV5 523 aa12.51□□□□□ -0.41
RETREG3-203ENST00000585894 TBATAQ96M53 351 aa12.51□□□□□ -0.41
RETREG3-203ENST00000585894 CHRAC1Q9NRG0 131 aa12.51□□□□□ -0.41
RETREG3-203ENST00000585894 NLE1Q9NVX2 485 aaPredicted RBP12.51□□□□□ -0.41
RETREG3-203ENST00000585894 ATXN10Q9UBB4 475 aa12.51□□□□□ -0.41
RETREG3-203ENST00000585894 CDC23Q9UJX2 597 aa12.51□□□□□ -0.41
RETREG3-203ENST00000585894 TCAF1Q9Y4C2 921 aa12.51□□□□□ -0.41
RETREG3-203ENST00000585894 ST14Q9Y5Y6 855 aa12.51□□□□□ -0.41
RETREG3-203ENST00000585894 DGKBQ9Y6T7 804 aa12.51□□□□□ -0.41
RETREG3-203ENST00000585894 TNFRSF10CO14798 259 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 SIGLEC6O43699 453 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 DNAJC6O75061 913 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 ZNF8P17098 575 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-203ENST00000585894 IVDP26440 423 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 AK4P27144 223 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-203ENST00000585894 MC4RP32245 332 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 GRK6P43250 576 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 PLA2G4EQ3MJ16 856 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 LRRC8BQ6P9F7 803 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 CRTC3Q6UUV7 619 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 PHYKPLQ8IUZ5 450 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 AGGF1Q8N302 714 aaeCLIP12.5□□□□□ -0.41
RETREG3-203ENST00000585894 OR13J1Q8NGT2 312 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 ZNF398Q8TD17 642 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 CDKN2AIPNLQ96HQ2 116 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 PWWP2AQ96N64 755 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 ASB8Q9H765 288 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 SPASTQ9UBP0 616 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 GPSM3Q9Y4H4 160 aa12.5□□□□□ -0.41
RETREG3-203ENST00000585894 COL5A1P20908 1838 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-203ENST00000585894 HEATR9A2RTY3 570 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 CCDC162PA2VCL2 907 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 DNALI1O14645 258 aaPredicted RBP12.49□□□□□ -0.41
RETREG3-203ENST00000585894 RAD51CO43502 376 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 PPFIA2O75334 1257 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 BANF1O75531 89 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 KCNK5O95279 499 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 IVLP07476 585 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 ADRA1DP25100 572 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 BLKP51451 505 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 PDE1BQ01064 536 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 DNAJC3Q13217 504 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 NFATC2Q13469 925 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 PUM1Q14671 1186 aaKnown RBP eCLIP12.49□□□□□ -0.41
RETREG3-203ENST00000585894 PYCR3Q53H96 274 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 ZRANB3Q5FWF4 1079 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 GPRC6AQ5T6X5 926 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 TSTD2Q5T7W7 516 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 ZDHHC20Q5W0Z9 365 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 PPIL6Q8IXY8 311 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 PPHLN1Q8NEY8 458 aaKnown RBP12.49□□□□□ -0.41
RETREG3-203ENST00000585894 BAHD1Q8TBE0 780 aaPredicted RBP12.49□□□□□ -0.41
RETREG3-203ENST00000585894 STYXQ8WUJ0 223 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 SERPINB12Q96P63 405 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 VPS35Q96QK1 796 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 RANBP9Q96S59 729 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 BFARQ9NZS9 450 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 SIRPGQ9P1W8 387 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 ZNHIT2Q9UHR6 403 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 PIKFYVEQ9Y2I7 2098 aa12.49□□□□□ -0.41
RETREG3-203ENST00000585894 YY2O15391 372 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 CSRP1P21291 193 aaKnown RBP12.48□□□□□ -0.41
RETREG3-203ENST00000585894 NMBRP28336 390 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 HADHAP40939 763 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 CDK16Q00536 496 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 CTBSQ01459 385 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 ITGA9Q13797 1035 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 DHX34Q14147 1143 aaKnown RBP12.48□□□□□ -0.41
RETREG3-203ENST00000585894 CCDC157Q569K6 752 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 PPM1JQ5JR12 505 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 PDPK2PQ6A1A2 396 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 SLC30A9Q6PML9 568 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 DET1Q7L5Y6 550 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 TAF8Q7Z7C8 310 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 NRROSQ86YC3 692 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 GALNT13Q8IUC8 556 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 PIANPQ8IYJ0 282 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 OR4C6Q8NH72 309 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 HDAC10Q969S8 669 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 SCARF2Q96GP6 870 aaPredicted RBP12.48□□□□□ -0.41
RETREG3-203ENST00000585894 CNDP2Q96KP4 475 aaKnown RBP12.48□□□□□ -0.41
RETREG3-203ENST00000585894 RUNDC3BQ96NL0 473 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 OR2M4Q96R27 311 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 TRIM39Q9HCM9 518 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 VPS18Q9P253 973 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 APPL1Q9UKG1 709 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 SNX24Q9Y343 169 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 MRFAP1Q9Y605 127 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 CACNA1AO00555 2505 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 ASXL3Q9C0F0 2248 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 LMO7DNF2Z398 122 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 NUAK1O60285 661 aa12.48□□□□□ -0.41
RETREG3-203ENST00000585894 GOT2P00505 430 aaKnown RBP12.48□□□□□ -0.41
RETREG3-203ENST00000585894 ANXA6P08133 673 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms