RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TFAP4Q01664 338 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 KLRC3Q07444 240 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 SCN1BQ07699 218 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 DYRK1AQ13627 763 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 NECTIN1Q15223 517 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 TBCCQ15814 346 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PTCHD3Q3KNS1 767 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 GALNTL6Q49A17 601 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 HSP90AA5PQ58FG0 334 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ANKS6Q68DC2 871 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 TTI2Q6NXR4 508 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 DLK2Q6UY11 383 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 RUFY3Q7L099 469 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PARS2Q7L3T8 475 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ANKRD33Q7Z3H0 272 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 GPAT4Q86UL3 456 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PALB2Q86YC2 1186 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC13Q8IYE1 715 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 RP9Q8TA86 221 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM174Q8WUU8 243 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 HSPH1Q92598 858 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 OTULINQ96BN8 352 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 NUDT22Q9BRQ3 303 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ADGRE3Q9BY15 652 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 RPAP3Q9H6T3 665 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 G6PC2Q9NQR9 355 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 CFAP45Q9UL16 551 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 AAR2Q9Y312 384 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ZFP37Q9Y6Q3 630 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 DPPA5A6NC42 116 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 TISP43B9A030 160 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 H7C0S8 307 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 SOCS2O14508 198 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PROM1O43490 865 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 HS6ST1O60243 411 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PTP4A3O75365 173 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 FLOT1O75955 427 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 STC2O76061 302 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 METTL18O95568 372 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 FGFR1OPO95684 399 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ATP5BP06576 529 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PEPDP12955 493 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 RARGP13631 454 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 KRT4P19013 534 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PBX1P40424 430 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 NRIP1P48552 1158 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ZBED6P86452 979 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PRKCZQ05513 592 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ELAVL2Q12926 359 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 TTC31Q49AM3 519 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 DUSP28Q4G0W2 176 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 GLE1Q53GS7 698 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 CBWD5Q5RIA9 395 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 OLFM4Q6UX06 510 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 CHST9Q7L1S5 443 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 SPATA21Q7Z572 469 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 METTL23Q86XA0 190 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 MB21D2Q8IYB1 491 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM133AQ8N9E0 248 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 LEMD2Q8NC56 503 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 MCPH1Q8NEM0 835 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PPTC7Q8NI37 304 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ATOH1Q92858 354 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ARHGEF2Q92974 986 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM227BQ96M60 508 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 KLHL15Q96M94 604 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 GLT1D1Q96MS3 346 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 MBOAT7Q96N66 472 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 NUDCD1Q96RS6 583 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ZSWIM1Q9BR11 485 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 VN1R3Q9BXE9 311 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 CADM1Q9BY67 442 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 SMOC2Q9H3U7 446 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 BPIFA1Q9NP55 256 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 HIF1ANQ9NWT6 349 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 COMMD8Q9NX08 183 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 SYBUQ9NX95 663 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 HSFX1Q9UBD0 423 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 KLQ9UEF7 1012 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 EXOC7Q9UPT5 735 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 KLHL20Q9Y2M5 609 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 NRCAMQ92823 1304 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 SYNRGQ9UMZ2 1314 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 LOC100509620A0A075B734 347 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 UNC119BA6NIH7 251 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 AKR1B15C9JRZ8 316 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 H3BNC9 293 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 AP4M1O00189 453 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PCDH17O14917 1159 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ATP2C2O75185 946 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 NDUFS3O75489 264 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 LETM1O95202 739 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 GH2P01242 217 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 EIF2S1P05198 315 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 CLEC3BP05452 202 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 CHRM2P08172 466 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 THEGLP0DJG4 465 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 MYBL1P10243 752 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ATP6V1B1P15313 513 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 GAP43P17677 238 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms