RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 SOCS5O75159 536 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 RECKO95980 971 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 MT-ND3P03897 115 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 CYP1A1P04798 512 aaPredicted RBP13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 RENBPP51606 427 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 MAXP61244 160 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 FMO1Q01740 532 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 IL10RBQ08334 325 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 PTP4A2Q12974 167 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 ELOAQ14241 798 aaKnown RBP13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 KCNAB1Q14722 419 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 KIR2DS5Q14953 304 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 HSP90AA4PQ58FG1 418 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 KLHDC7AQ5VTJ3 777 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 PWWP2BQ6NUJ5 590 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 IRGCQ6NXR0 463 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 USP45Q70EL2 814 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 SYVN1Q86TM6 617 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 MCEMP1Q8IX19 187 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 RHOT1Q8IXI2 618 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 PGBD5Q8N414 524 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 COX14Q96I36 57 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 MCEEQ96PE7 176 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 PSKH2Q96QS6 385 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 DHX35Q9H5Z1 703 aaKnown RBP13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 ARFGAP3Q9NP61 516 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 ADAM22Q9P0K1 906 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 SCHIP1Q9P0W5 487 aaPredicted RBP13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 AP4E1Q9UPM8 1137 aa13.95□□□□□ -0.18
CSNK1D-224ENST00000584672 GOLGA6L3A6NEY3 463 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 PRKCSHP14314 528 aaPredicted RBP13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 SLC2A4P14672 509 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 PPP1CAP62136 330 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 RPL7AP62424 266 aaKnown RBP13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 RPS15P62841 145 aaKnown RBP13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 UBE2IP63279 158 aaKnown RBP13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 CDR2Q01850 454 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 TUBB3Q13509 450 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 RFTN1Q14699 578 aaPredicted RBP13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 SEPT7Q16181 437 aaKnown RBP13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 MAN2A1Q16706 1144 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 PLA2G4EQ3MJ16 856 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 PLEKHN1Q494U1 663 aaPredicted RBP13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 TMEM26Q6ZUK4 368 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 TRIM48Q8IWZ4 208 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 IQCKQ8N0W5 287 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 SLC34A3Q8N130 599 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 TTC30BQ8N4P2 665 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 MR1Q95460 341 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 SCRN2Q96FV2 425 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 MCCC1Q96RQ3 725 aaPredicted RBP13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 NAA15Q9BXJ9 866 aaKnown RBP13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 VPS16Q9H269 839 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 NDST4Q9H3R1 872 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 RWDD2AQ9UIY3 292 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 SIK3Q9Y2K2 1263 aa13.94□□□□□ -0.18
CSNK1D-224ENST00000584672 CEACAM4O75871 244 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 PGLSO95336 258 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 VIPP01282 170 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 PDHA1P08559 390 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 FOLR1P15328 257 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 UCHL3P15374 230 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 ERCC2P18074 760 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 VARSP26640 1264 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 ITGA1P56199 1179 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 LAMB3Q13751 1172 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 KYNUQ16719 465 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 ZNF648Q5T619 568 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 ARMC12Q5T9G4 340 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 DNAJC24Q6P3W2 148 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 CERS6Q6ZMG9 384 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 PHYKPLQ8IUZ5 450 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 EXD1Q8NHP7 514 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 SEC14L1Q92503 715 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 NUDCD1Q96RS6 583 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 KCTD15Q96SI1 283 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 PCDHB18PQ96TA0 734 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 PDE7BQ9NP56 450 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 KLC4Q9NSK0 619 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 GPR83Q9NYM4 423 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 ITGB1BP2Q9UKP3 347 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 RARRES3Q9UL19 164 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 G3BP2Q9UN86 482 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 ENTPD4Q9Y227 616 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 FARSAQ9Y285 508 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 NF1P21359 2839 aa13.93□□□□□ -0.18
CSNK1D-224ENST00000584672 HIVEP1P15822 2718 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 CSMD2Q7Z408 3487 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 A0A1W2PQ67 120 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 TMEM63AO94886 807 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 EBLN1P0CF75 366 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 SLC19A1P41440 591 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 NSFP46459 744 aaKnown RBP13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 ZNF143P52747 638 aaPredicted RBP13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 PTSQ03393 145 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 TPD52L1Q16890 204 aaPredicted RBP13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 VWA3BQ502W6 1294 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 PPP6R3Q5H9R7 873 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms