RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 CD300LGQ6UXG3 332 aa11.23□□□□□ -0.61
TOP3A-217ENST00000584582 GPRIN3Q6ZVF9 776 aa11.23□□□□□ -0.61
TOP3A-217ENST00000584582 OR56A4Q8NGH8 313 aa11.23□□□□□ -0.61
TOP3A-217ENST00000584582 MYO19Q96H55 970 aa11.23□□□□□ -0.61
TOP3A-217ENST00000584582 CCT7Q99832 543 aa11.23□□□□□ -0.61
TOP3A-217ENST00000584582 MTG2Q9H4K7 406 aa11.23□□□□□ -0.61
TOP3A-217ENST00000584582 BAG5Q9UL15 447 aa11.23□□□□□ -0.61
TOP3A-217ENST00000584582 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-217ENST00000584582 PDLIM1O00151 329 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 PRMT5O14744 637 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 SCAMP1O15126 338 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 INPPL1O15357 1258 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 SMAD6O43541 496 aaKnown RBP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 SERPIND1P05546 499 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 LYNP07948 512 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 FAM163BP0C2L3 166 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 VCLP18206 1134 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 DGKQP52824 942 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 SH3BP2P78314 561 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 MSLNQ13421 630 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 BLMHQ13867 455 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 CCNIQ14094 377 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 CRY1Q16526 586 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 SYTL3Q4VX76 610 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 RABL3Q5HYI8 236 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 MBOAT1Q6ZNC8 495 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 CYS1Q717R9 158 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 ANKRD46Q86W74 232 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 APCDD1Q8J025 514 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 ZNF461Q8TAF7 563 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 ACTRT2Q8TDY3 377 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 NUDT8Q8WV74 236 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 SORCS1Q8WY21 1168 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 SNX19Q92543 992 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 KCTD14Q9BQ13 255 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 TRIM54Q9BYV2 358 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 MFSD1Q9H3U5 465 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 TNFRSF12AQ9NP84 129 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 POLR3HQ9Y535 204 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 KRT87PA6NCN2 255 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 MYO1GB0I1T2 1018 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 GSRP00390 522 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 GNAZP19086 355 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 ATP6V1B2P21281 511 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 PRKAA2P54646 552 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 ABRQ12979 859 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 INPP5AQ14642 412 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 AARS2Q5JTZ9 985 aaKnown RBP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 METTL21CQ5VZV1 264 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 ISCA2Q86U28 154 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 BCL7CQ8WUZ0 217 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 PTCD2Q8WV60 388 aaKnown RBP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 C3orf30Q96M34 536 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 TSSK3Q96PN8 268 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 BOCQ9BWV1 1114 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 NSUN3Q9H649 340 aaKnown RBP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 MKS1Q9NXB0 559 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 VPS51Q9UID3 782 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 AP4B1Q9Y6B7 739 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 CASQ2O14958 399 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 PER2O15055 1255 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 LDB2O43679 373 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 CLPTM1O96005 669 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 ABCB1P08183 1280 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 ZNF37AP17032 561 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 MAPKAPK2P49137 400 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 RPL34P49207 117 aaKnown RBP11.22□□□□□ -0.61
TOP3A-217ENST00000584582 TRAF2Q12933 501 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 GTF2H3Q13889 308 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 SQLEQ14534 574 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 ARRDC2Q8TBH0 407 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 STK39Q9UEW8 545 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 U3KQV3 271 aa11.22□□□□□ -0.61
TOP3A-217ENST00000584582 PAPPA2Q9BXP8 1791 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 CCDC189A1A4V9 331 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 CDK14O94921 469 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 CPSF4O95639 269 aaKnown RBP11.21□□□□□ -0.61
TOP3A-217ENST00000584582 C8AP07357 584 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 IMPDH1P20839 514 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 PSMA4P25789 261 aaKnown RBP11.21□□□□□ -0.61
TOP3A-217ENST00000584582 STC1P52823 247 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 DSC1Q08554 894 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 BBS7Q8IWZ6 715 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 OR52B6Q8NGF0 335 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 MAGEE2Q8TD90 523 aaPredicted RBP11.21□□□□□ -0.61
TOP3A-217ENST00000584582 IGSF21Q96ID5 467 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 FEM1CQ96JP0 617 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 SPATA17Q96L03 361 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 C1orf74Q96LT6 269 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 PKP2Q99959 881 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 ELOVL6Q9H5J4 265 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 YY1AP1Q9H869 796 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 IPPKQ9H8X2 491 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 ZBTB26Q9HCK0 441 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 IGSF5Q9NSI5 407 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 SPG21Q9NZD8 308 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 OPTCQ9UBM4 332 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 SLC8A2Q9UPR5 921 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 TRIM38O00635 465 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms